Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00275 ATGGAGGGAAAGTGGATGAGTTCCCAATCACAGTCAACGAACTTCCACTTACTCGCCAAGATCAAAGAGTTCACTCGATCTATCGTCACTGACCTCAGCAACGGTCAATCGCCGGTCATCCTCATCCACCGGTTCAGGAATCACTGCACTAGTCCCAATTCCAATTGCTTTTGTGGCTTCAATCTACCATGCGGGAAGGATGTTCTCACTCTCTGCAGGGAATCGCACGTACACAGAATAGATGTGATGTTGAGAGTGCTACTCATTGTTCAGAAACTTTTGCAAGAGAACAGGCATTGTTCCAAGAGGGATATTTATTACATGCATCCTTCTGTGTTTTCAGATCAGTCAGTTGTAGACCATGCAATTAATGATATATGTGTCCTTATGCAGTGCAGTCGCCATAACCTTAATGTGGTTTCTGCTGGGAAGGGGTTAGTTATGGGATGGATAAGATTCTTTGAAGGAAAAAGGCTGTTTGACTGCATCAGTTCTCCGAACAAGGTCCACCCTATTCCTGTTCATGTTGAAGAAGTTAAAGATATCATTAGTGTTGCTCACTACATATTAGTCGTTGAGAAAGAATCAGTTTTCGAAAGACTAGCAAATGACCAGTTCTGCAGTGCAAACCACTGCATTGTGATCACTGGAAGAGGCTACCCGGATATTCCTACAAGAAGGTTTCTGCGTCTTCTAGTTGAGGATTTGCACCTGCCTGCATATTGCTTGGTCGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCCATGCAAATGGCTTATGACACAAAACATCTTCGTGTCCCGGAGATACAATGGCTTGGAGCTTATCCTTCAGATGCTGAGAGATATTTTATTCCAAAGCAGTGTCTACTTTCTCTAACTGCTGAAGACAAGAGGAAACTTGAAGCCATGTTGCTTAGATGCTACCTGCAAAGGGATGTGCCACAATGGAGGTTGGAGCTAAAGATGATGCTGGAGAAAGGAGTGAAGTTTGAGATTGAAGCATTATCTGTGCATGCTCTTTCATTCTTGTCAATGTCTTACCTGCCATCTAAAATTCAAGGTAAAATGATCATTTAG 1098 0.4281 MEGKWMSSQSQSTNFHLLAKIKEFTRSIVTDLSNGQSPVILIHRFRNHCTSPNSNCFCGFNLPCGKDVLTLCRESHVHRIDVMLRVLLIVQKLLQENRHCSKRDIYYMHPSVFSDQSVVDHAINDICVLMQCSRHNLNVVSAGKGLVMGWIRFFEGKRLFDCISSPNKVHPIPVHVEEVKDIISVAHYILVVEKESVFERLANDQFCSANHCIVITGRGYPDIPTRRFLRLLVEDLHLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAYPSDAERYFIPKQCLLSLTAEDKRKLEAMLLRCYLQRDVPQWRLELKMMLEKGVKFEIEALSVHALSFLSMSYLPSKIQGKMII 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00275 365 Pfam Type IIB DNA topoisomerase 79 139 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Arst7g00275 365 Gene3D - 2 142 IPR036388 -
Arst7g00275 365 SUPERFAMILY DNA topoisomerase IV, alpha subunit 77 361 IPR036078 GO:0003677|GO:0005694
Arst7g00275 365 CDD TOPRIM_TopoIIB_SPO 187 349 IPR034136 -
Arst7g00275 365 PRINTS DNA topoisomerase VI subunit A family signature 102 113 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 PRINTS DNA topoisomerase VI subunit A family signature 116 133 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 PRINTS DNA topoisomerase VI subunit A family signature 134 149 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 PRINTS DNA topoisomerase VI subunit A family signature 245 261 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 PRINTS DNA topoisomerase VI subunit A family signature 189 206 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 PRINTS DNA topoisomerase VI subunit A family signature 213 234 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 FunFam DNA topoisomerase 6 subunit A 143 365 - -
Arst7g00275 365 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 16 361 IPR002815 GO:0003677|GO:0003918|GO:0005694
Arst7g00275 365 Gene3D - 143 365 - -
Arst7g00275 365 PRINTS SPO11 homologue signature 285 309 IPR013048 GO:0003677|GO:0003918|GO:0042138
Arst7g00275 365 PRINTS SPO11 homologue signature 250 269 IPR013048 GO:0003677|GO:0003918|GO:0042138
Arst7g00275 365 PRINTS SPO11 homologue signature 346 365 IPR013048 GO:0003677|GO:0003918|GO:0042138
Arst7g00275 365 PRINTS SPO11 homologue signature 203 218 IPR013048 GO:0003677|GO:0003918|GO:0042138
Arst7g00275 365 PRINTS SPO11 homologue signature 108 128 IPR013048 GO:0003677|GO:0003918|GO:0042138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00275 Arst-Chr7 1718823 1722474 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00275 K10878 - gmx:100813920 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00275 7 1718823 1722474 Arst7g00275 7 1718823 1722474 ECH