Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst7g00272 ATGGGGCGGGTTGGAGCCACAAGCGCCGTTGGCTTCGGTGGCGCCATTTTGGTGTGCGTAGCTTTTGCCTACTTCATCTCCGACCGTCGTTGGAAGAAGAAGAAGAAACCGATTACGAAGAAAACCAGAGGAGGAGTGGTTGATGCCATTGGCAACACTCCTTTGATTCGAATCAACAGCCTCTCCGATGCTACTAACTGCCAAATTCTTGCCAAGTGCGAGTTCCTTAACCCTGGTGGCAGCGTCAAAGATCGCGTTGCTCTTCAAATTATCCAAGAGGCCTTGGAATCTGGCCAGCTAAGTCCAGGTGGAATAATCACTGAAGGGAGTGCTGGTAGCACTGCCATTAGCATCGCAACGGTTGCTCCTGCATTTGGATGCCAATGCCACGTTGTTATACCCGATGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCCCTTGGGGCAACTGTTGAAAGAGTAAGACCAGTGTCAATTACTCACAAAGATCATTTTGTCAATATTGCAAGGAGAAGGGCATCTGAAGCAAATGAGTTCGCATCAAAGCTCAGAAATTCACAATTGAATGGCAAGGACACAGACCAGATAAACGGTCACAAATCCAATGGTTATGATCACGATTCACTCTTCCCTACTGATTGTAAAGGTGGGTTTTTTGCGGATTAGTTTGAGAATTTGGCGAACTTTAGAGCTCATTATGAGGGTATAGGGCCTGAGATTTGGGAACAAACCAATGGAAATTTGGATGCATTTGTTGCAGCAGCAGGCACTGGTGGCACTGTGGCTGGTATTAGCAGTTTTCTTCAGGAAAAGAATCCAGGGATCAAGTGCTTCCTTATAGATCCTCCTGGTTCCGGTTTGTATAACAAGGTAACAAGGGGAGTTATGTATACAAAAGAGGAGGCAGAAGGACGAAGACTTAAGAATCCATTTGACACCATAACAGAAGGAATCGGAATTAACAGGATAACAAGGAATTTTGCAAAGGCAAAGCTTGATGGCGCATTTCGAGGCACAGATCTTGAGGCTGTTGAAATGGCTAGGTTCCTCTTGAAGAATGATGGGCTCTTCTTAGGAAGCTCTTCAGCAATGAATTGTGTAGGAGCAGTTAGAGTAGCGCAGGCATTGGGCCCTGGTCACACAATTGTGACAATCCTCTGTGACAGTGGAATGCGACACCTGAGCAAGTTCCACAACGACGAATACTTGTCTCAGCTTGGATTGATGCCAAAAGCAACTGGATTGGAGTTCTTGGGCATCAAATGA 1269 0.4594 MGRVGATSAVGFGGAILVCVAFAYFISDRRWKKKKKPITKKTRGGVVDAIGNTPLIRINSLSDATNCQILAKCEFLNPGGSVKDRVALQIIQEALESGQLSPGGIITEGSAGSTAISIATVAPAFGCQCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANEFASKLRNSQLNGKDTDQINGHKSNGYDHDSLFPTDCKGGFFADXFENLANFRAHYEGIGPEIWEQTNGNLDAFVAAAGTGGTVAGISSFLQEKNPGIKCFLIDPPGSGLYNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITRNFAKAKLDGAFRGTDLEAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQALGPGHTIVTILCDSGMRHLSKFHNDEYLSQLGLMPKATGLEFLGIK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst7g00272 422 Gene3D - 77 184 IPR036052 -
Arst7g00272 422 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 31 403 IPR036052 -
Arst7g00272 422 FunFam Cysteine synthase 231 395 - -
Arst7g00272 422 CDD CBS_like 51 396 - -
Arst7g00272 422 FunFam Cysteine synthase, putative 50 79 - -
Arst7g00272 422 PANTHER CYSTATHIONINE BETA-SYNTHASE 45 404 - -
Arst7g00272 422 Pfam Pyridoxal-phosphate dependent enzyme 48 389 IPR001926 -
Arst7g00272 422 Gene3D - 198 404 IPR036052 -
Arst7g00272 422 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 72 90 IPR001216 GO:0006535
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst7g00272 Arst-Chr7 1708079 1710524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst7g00272 50 396 Miscellaneous Gene Families AT3G04940 29.513 5.82e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst7g00272 K01738 - gmx:100799081 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g00272 7 1708079 1710524 Arst7g00272 7 1708079 1710524 ECH