Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04206 ATGGCCAAACCGAGTGCCGACGATGGCGAGCTCCGGCGGGCATGCACGGCGGCGATTGAGGATCCCCACCAGAAGATCGTGATGGCGATCAGAGTAGCGAAATCCCACGGGATCTTGGGAAAATCTTCCAAGCTTGGCCGCCAGATGGCGAAGCCAAGGGTTCTTGCTCTCTCCATGCAATCAAAAGGTCAGAGGACAACAGCATTTCTTCATGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAGCCTGCTAAGCTATACAAGCTGAAGTACCTCTCAAAAGTGGAAGTTTTGACAAATGACCCCAGTGGATGTACATTTACGCTGGGATTTGATAACCTCAGAAGCCAGAGCGTGGCTCCTCCTCAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTTCTTCGCATCCTGAACACATGCAAAGATGTTTTGGGTCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTTGAGATGGCTCTTTGGGCTAAGGAAAATACACCCACGGCTCCTGCTCAGAGTAAAGTTCGAGATGGTGTTCCTGTTGCTTCTGCTGTTTCTGAGACGGAATTGAAAGTCAATGTCGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATAGGTGTTGGTGAAGCTGAGGCATTTTCTGAAAGGTTGAAGAGAGAGCTTCAAGCTCTAGAAGCAGCAAACGTGCATGCCATTTTAGAAAGTGAACCTTTGATGGATGGGGTGATGCAAGGACTTGAGTCAGCAACAAATTGTGTGGATGACATGGATGAATGGTTAAACATATTTAACGTGAAACTCCGGCACATGAGAGAGGACATTGAATCAATAGAATCCCGCAATAACAAATTGGTAATGCAATCGGTGAACAACAAATCTCTTATTGAGGAGCTCGATAAGCTTCTTGAAGGATTGAATGTCCCTCCAGAGTATGCATCAAGTTTGACAGGAGGTTCATTTGATGAAGCTAGAATGCTTCAGAATGTAGAAGCATGTGAATGGTTGACTGGTGCCTTACGTGGTCTTGAAGCGCCTAATCTAGACCCTGCATATGCAAATATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAAACTACTTTTGTTAGGAGAGCATCAGAATTCTTGAGGAATTACTTTGCTAGTTTGGTGGATTTCATGATAAGTGATAAAAGCTACTTCTCTCAGCGAGGACAGTTGAAGAGGCCTGATCATGCGGATTTGCGGTACAAATGCAGGACATATGCACGTCTCTTGCAACACTTGAAGAGTCTTGACAAGAATTGCTTGGGTCCATTGAGAAAAGCTTATTGCAGTTCTCTAAATTTGCTTCTTCGCCGAGAGGCTCGTGAATTTGCAAATGAACTTCGTGCTAGTACCAAAGCATCTAGGAACCCCACGGTTTGGCTTGAAGGTTCTACAGGTTCTGGTCAGAATGTCAATGCCACTGACACTTCAACAGTCTCTGATGCTTACGCAAAGATGCTAACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCATTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACGCTTGTTCCTCCAGGAGGTGTTGTTAATGGTAATAAACCTGAATATGATGACGATGATGATTTGGGAATTATGGACATTGATGACAATGACAGTAAATCTGGTAAAAATTCTGCCGAGCTTGCAGCTTTAAACGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCTACGCGGTTGTAGATTGGGCATACAAGATTGATCCCTTGCGCTGCATATCAATGCATGGAATAACGGAACGATATCTTTCCAGTCAGAAAGCCGATGCAGCAGGATTTGTACGCCTTTTGCTTGGTGACCTAGAGGCTCGTATATCTATGCAGTTTGGCCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGGAATGAACGCAATGTTCGCCAAGTTGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTGGCAACTCGGATGGAGCAGTATATTCAGGGACAGTCTAGGGATTTGGTAGACCAGGCATACACAAAATTTGTTAGCATAATGTTTGCGACTTTGGAAAAAATAGCACAAACAGATCCAAAGTATGCTGATATTTTTCTCTTAGAGAACTATGCCGCCTTTCAAAATAGTTTGTATGACCTTGCCAACATTGTGCCTACTTTGGCTAAGTTTTATCACCAGGCTAGTGAAGCCTATGAGCAAGCTTGTACGCGCCATATTAGCATGATAATCTATTATCAATTCGAGCGCCTTTTTCAATTTCATCGGAGGATTGAGGACTTGATGTTCACAGTTGCACCTGAGGAGATTCCTTTCCAACTCGGGCTATCAAAGATGGATCTTCGAAAGATGCTAAAATCCAGTTTATCGGGGGTTGACAAGTCCATTGCTGCAATGTACAAGAAATTGCAGAAGAACTTGACTTCAGAAGAACTATTACCCTCCTTATGGGATAAATGCAAGAAGGAATTTGTTGACAAGTACGAAAGTTTTGCACAACTTGTGGCTAAGATTTACCCTAATGAGAATATCCCTTCGGTAACAGAGATGAGAGAACTTTTAGCCTCCATGTAA 2652 0.4348 MAKPSADDGELRRACTAAIEDPHQKIVMAIRVAKSHGILGKSSKLGRQMAKPRVLALSMQSKGQRTTAFLHVLKYSTGGVLEPAKLYKLKYLSKVEVLTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLRILNTCKDVLGRLPKVVGIDVVEMALWAKENTPTAPAQSKVRDGVPVASAVSETELKVNVEKELVSQAEEEDMEALLGTYVIGVGEAEAFSERLKRELQALEAANVHAILESEPLMDGVMQGLESATNCVDDMDEWLNIFNVKLRHMREDIESIESRNNKLVMQSVNNKSLIEELDKLLEGLNVPPEYASSLTGGSFDEARMLQNVEACEWLTGALRGLEAPNLDPAYANMRAVKEKRAELEKLKTTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKPEYDDDDDLGIMDIDDNDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSSQKADAAGFVRLLLGDLEARISMQFGRFVDEACHQIERNERNVRQVGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLLENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFHRRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFVDKYESFAQLVAKIYPNENIPSVTEMRELLASM 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04206 883 Coils Coil 221 248 - -
Arst6g04206 883 Coils Coil 188 208 - -
Arst6g04206 883 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Arst6g04206 883 PANTHER SEC3/SYNTAXIN-RELATED 49 876 - -
Arst6g04206 883 PANTHER SEC3/SYNTAXIN-RELATED 49 876 - -
Arst6g04206 883 Coils Coil 281 301 - -
Arst6g04206 883 Pfam Exocyst complex component Sec3 224 485 IPR019160 GO:0000145|GO:0006887
Arst6g04206 883 Pfam Exocyst complex component Sec3 564 867 IPR019160 GO:0000145|GO:0006887
Arst6g04206 883 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04206 Arst-Chr6 110137788 110147491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04206 1 883 EF-hand Containing Proteins AT1G47550 85.602 0.0 1573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g04206 K19983 - gmx:100784141 1571.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04206 6 110137788 110147491 Arst6g04206 6 110137788 110147491 ECH