Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03915 ATGGCTGATGATGATGATTCCCCTAGTATAGGGGACACAATATGTAAAGTTTTGATGCCATTCATGGCTGTGGTTGAAGTATTCATGATTGCTGTGGCTAATTGTTTCAACTATCAATCAAGATGCATTGGTAAAAATCAGAAACCTTACTACAATTATGAGGATCTCGCTCGCCTTGCTCAAGGAACCAGATTTACTGTTAATGAAGTGGAGGCATTGTATGTGCTGTTTAAGAGGTTAAGTAGCTCCATAATTGATGATGGTTTGATTCACAAGGAGGAACTTCAATTGGCTCTATTCCAAACTCCTAATGGAGAAAATTTTTTCCTAGATCGAGTATTTGACCTTTTTGACGAGAAAAGCAAGGGTGTTATCGACTTTGACGAATTTGTCCACACGCTCAGTATTTTCCATCCTTATGCTCCTCTAGAAGAAAAAATTGATTATGCATTTAAGCTTTATGATATACGAAAAACTGGATTTATCGAGCGAGAAGAACTCAAGCAAATGGTGAAAGCCATGTTGATGGAATCTGACATGAACCTTTCGGACGATCTTCTTGAAGCTATTGTTGACAAGACAATTGCTGATGCCGATAAGGATAAGGATGGTAAAATCAGTAAAGAAGATTGGAAAGTTTTTGTGAGTAGAAATCCATCCATATTGAAGAACATGACACTTGCTTATTTGAAGTAA 696 0.3721 MADDDDSPSIGDTICKVLMPFMAVVEVFMIAVANCFNYQSRCIGKNQKPYYNYEDLARLAQGTRFTVNEVEALYVLFKRLSSSIIDDGLIHKEELQLALFQTPNGENFFLDRVFDLFDEKSKGVIDFDEFVHTLSIFHPYAPLEEKIDYAFKLYDIRKTGFIEREELKQMVKAMLMESDMNLSDDLLEAIVDKTIADADKDKDGKISKEDWKVFVSRNPSILKNMTLAYLK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03915 231 Pfam EF-hand domain pair 144 210 IPR002048 GO:0005509
Arst6g03915 231 CDD EFh 146 216 IPR002048 GO:0005509
Arst6g03915 231 PRINTS Recoverin family signature 160 178 - -
Arst6g03915 231 PRINTS Recoverin family signature 206 226 - -
Arst6g03915 231 PRINTS Recoverin family signature 113 134 - -
Arst6g03915 231 PRINTS Recoverin family signature 51 65 - -
Arst6g03915 231 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Arst6g03915 231 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
Arst6g03915 231 FunFam calcineurin B-like protein 3 55 231 - -
Arst6g03915 231 PANTHER CALCINEURIN B 46 231 IPR045198 GO:0005509|GO:0019722|GO:0019900
Arst6g03915 231 SUPERFAMILY EF-hand 56 228 IPR011992 -
Arst6g03915 231 ProSiteProfiles EF-hand calcium-binding domain profile. 142 177 IPR002048 GO:0005509
Arst6g03915 231 SMART efh_1 109 137 IPR002048 GO:0005509
Arst6g03915 231 SMART efh_1 190 218 IPR002048 GO:0005509
Arst6g03915 231 SMART efh_1 146 174 IPR002048 GO:0005509
Arst6g03915 231 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Arst6g03915 231 Gene3D - 55 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03915 Arst-Chr6 107410760 107414968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03915 1 194 EF-hand Containing Proteins AT4G33000 58.763 5.59e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03915 K06268 - qsa:O6P43_015911 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03915 6 107410760 107414968 Arst6g03915 6 107410760 107414968 ECH