Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03897 AAACACCCTCAAAACCCTATAATCACTGCCCCAATTGGATTAGTTGAACAAGAAAATTTTAGAGATCCAACAACAGCTTGGAAGGGTAGTGATGGAAAATGGAGGGTCATAATTGGTGCTAGAAATGGTGATTTAGGGAAGGCAATTTTATACCATAGTGATGATTTTATTAATTGGAAATTAAGCCCTAATAATCATCAATTCTATGTAATTGATGGCATTGGAATGTGTGAGTGCCCTGATTTTTTTCCAGTTTTAATTGATGGTACAAAGCATGGGGTTGATTTAGATTCTTCTTCAGTTCAAGATTCTAATGATGTTATTAGGCATGTGTTGAAGATAAGTTACCAAAATAAACAGCAAGAACATTATTTGGTAGGTAAGTATGTTTGTGATGAGGACAAGTTTGTTGCTGAGAATAAAATTACAGGGACTAGTTTGGACTTGAAATTGGACCATGGTGAATTTTATGCTTCAAAATCATTCTTTGACTATGCCAAGAAGAGAAGGGTATTATGGGGATGGGTTAAAGAGCTTGATACAGAACAAGATGATATTCTTAAAGGATGGGCTGGTCTACAGGGCATTCCAAGGCAAGTGTGGCTTCATGAAAATGGGAAGTGGCTGATGCAGTGGCCAATAGAAGAGTTAGAGACACTTAGATACTCCGACAATGAAGTTAGTATTTTGGGACACAAACTTGTTGCTGGATCAACTCTTCAAGTCTCAGGTATCACTGCATCACAGGCTGATGTAGAAGTAGTGTTTGAACTACCTGAACTGGAAAGTGCAGAATGGTTAGATTCAAAAGAAGTTGATCCCCAAATAGTGTGTAGTGATAAAGAATATGCATCAAGAAGTGGCATAATAGGCCCATTTGGTTTACTGGCTTTAGCTTCAAAGGATCTTACAGAGCAAACTGCAATTTTCTTCACAATCTTTAGAACTTCCAATGGATTTTCATGTCTCATGTGCACTGATCTTACCAGGTCTTCATTGAGGCAAGACGTTCATAAAACCACATATGCAACTATCTTTGCCATAGATTCCAATCTCAAAGCAATTTCACTTAGAACCTTGATTGATGGGTCGATTATAGAGAGTTTTGGAGAGAAAGGAAGAGTTTGTATCACAAACAGAGTTTATCCCTTGTTGGCTACTGAAAAGGATGCTCATCTTTATGTCTTTAACAATGGAAAACAGAATGTTTGCATCTCAAAACTAAATGCTTGGAGCATGAAGCCAGCAAAGTTTGTTCAACAGTGA 1266 0.3744 KHPQNPIITAPIGLVEQENFRDPTTAWKGSDGKWRVIIGARNGDLGKAILYHSDDFINWKLSPNNHQFYVIDGIGMCECPDFFPVLIDGTKHGVDLDSSSVQDSNDVIRHVLKISYQNKQQEHYLVGKYVCDEDKFVAENKITGTSLDLKLDHGEFYASKSFFDYAKKRRVLWGWVKELDTEQDDILKGWAGLQGIPRQVWLHENGKWLMQWPIEELETLRYSDNEVSILGHKLVAGSTLQVSGITASQADVEVVFELPELESAEWLDSKEVDPQIVCSDKEYASRSGIIGPFGLLALASKDLTEQTAIFFTIFRTSNGFSCLMCTDLTRSSLRQDVHKTTYATIFAIDSNLKAISLRTLIDGSIIESFGEKGRVCITNRVYPLLATEKDAHLYVFNNGKQNVCISKLNAWSMKPAKFVQQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03897 421 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 213 IPR013148 -
Arst6g03897 421 SUPERFAMILY Concanavalin A-like lectins/glucanases 213 415 IPR013320 -
Arst6g03897 421 Gene3D Glycosyl hydrolase domain; family 43 1 225 IPR023296 -
Arst6g03897 421 SMART glyco_32 1 373 IPR001362 GO:0004553|GO:0005975
Arst6g03897 421 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 227 413 - -
Arst6g03897 421 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 417 - -
Arst6g03897 421 SUPERFAMILY Arabinanase/levansucrase/invertase 1 214 IPR023296 -
Arst6g03897 421 Gene3D - 226 413 - -
Arst6g03897 421 Pfam Glycosyl hydrolases family 32 C terminal 216 412 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03897 Arst-Chr6 107242373 107245205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03897 1 417 Glycoside Hydrolase AT3G13790 47.754 4.37e-131 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03897 - K01193 adu:107495459 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03897 6 107242373 107245205 Arst6g03897 6 107242373 107245205 ECH