Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03895 ATGTACTATAAAGGTGTTTACCACCTTTTCTACCAGCATAATCCTTATGCAGCAACCTTTGGAGACAGAATTGTATGGGCTCATTCTGTGTCCTATGATCTCATCAATTGGATTCATCTAAACAATGCTATCGAACCGAGCGAGCCTTTCGACATCAATAGCTGCTGGTCAGGTTCAGCCACCATACTCGAAGGAGGCGAAAAGCCTTTTATTTTGTACACAGGTATTGATGAAAACAAACACCAAGTTCAAAACTTGGCTATTCCAAAGAATGCATCAGATCCTTTCCTAAGAGAATGGATCAAACTCCCTCAAAACCCTGTGATGAAACCACCAATTGGTGTTGAGTTGAACAATTTTAGAGACCCTTCAACTGCTTGGCTTGGAAATGATGGAAAATGGAGGGTAGTTGTTGGTGCTCAAAATGGTGATCAAGGGAAGGTTATTTTGTACCATAGTAAGGATTTTGTTGATTGGAAAGTGGATTCTAGGCCGTTTTTCGCGACGGATAACACCGGAGTTTGCGAGTGTCCGGACTTCTTTCCGGTGTTGATCAAAGGCGAAAATGGAGTAGATACATCTTTTGATCATCAAGATTCTAATTTTGTTAGGCATGTAATGAAGATAAGTTATCTTAGTAGGTTACATGACTATTATTTTCTTGGAAACTATAATGTCTTTGGTGACAATGAAAATTTTGTTCCTGATGTTAAATTCACAGGAACTAGTTCAGATTTAAGGTATGATTATGGTAAATTTTATGCTTCCAAATCATTTTTTGATTATGCTAAGAACAGGAGAATATTGTGGGGATGGGTGAATGAATCTGATTCTACACAAGATGATATTCAAAAAGGATGGGCTGGTATACAGTCAATTCCAAGGCAAATTTGGCTTGATAAAAGTGGGAAGAGATTGGTGCAATGGCCAATTGAAGAGATTGAAAAATTACATGACAAACAAGTTAGCATTAGTAAAGAAAACCTCCTTAGTGGATCAACTCTTCAAGTCTCCGGCATCATTGCATCACAGGTTGATGTAGAAGTGGTATTTGAAATATCCGAAGTAGAAAGTGCAGAATGGTTAGATCCAAAGGGTGTTGATCCACAAATACTATGTAGCAAAAAAGAAGATGGATCAAGAAGTGGCAAAATTGGACCATTTGGTTTGTTAGCTTTGGCATCAGAGGATCTCCGAGAGCAAACTTCAGTGTTCTTTCAAATCTATAAAGCTCCAAATAGATATGTAGGCCTAATGTGTAGTGATCAAAGCAGGTCTTCATTAAGAGATGACCTTGATAAAACTACATATGGAACTTTCTTTGACATAGATCCTACTCAAAAAACAATTTCTCTTAGAACATTGATTGACCACTCTATTGTTGAAAGTTTTGGAGATGAAGGGAGAATTTGTATCACCAGTAGAGTTTATCCTTCTTTGGCTATAGACAAAAATGCTCATCTTTTTGTATTTAATAATGGGATTCAAACTATACAAATTTCAAAATTAAATGCTTGGAGCATGAAGCAAGCACAAATTGGCTATGAGGGCAATATAAGTTGTGTTTGA 1569 0.3709 MYYKGVYHLFYQHNPYAATFGDRIVWAHSVSYDLINWIHLNNAIEPSEPFDINSCWSGSATILEGGEKPFILYTGIDENKHQVQNLAIPKNASDPFLREWIKLPQNPVMKPPIGVELNNFRDPSTAWLGNDGKWRVVVGAQNGDQGKVILYHSKDFVDWKVDSRPFFATDNTGVCECPDFFPVLIKGENGVDTSFDHQDSNFVRHVMKISYLSRLHDYYFLGNYNVFGDNENFVPDVKFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDIQKGWAGIQSIPRQIWLDKSGKRLVQWPIEEIEKLHDKQVSISKENLLSGSTLQVSGIIASQVDVEVVFEISEVESAEWLDPKGVDPQILCSKKEDGSRSGKIGPFGLLALASEDLREQTSVFFQIYKAPNRYVGLMCSDQSRSSLRDDLDKTTYGTFFDIDPTQKTISLRTLIDHSIVESFGDEGRICITSRVYPSLAIDKNAHLFVFNNGIQTIQISKLNAWSMKQAQIGYEGNISCV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03895 522 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 310 IPR013148 -
Arst6g03895 522 Gene3D - 322 508 - -
Arst6g03895 522 Pfam Glycosyl hydrolases family 32 C terminal 314 507 IPR013189 -
Arst6g03895 522 SUPERFAMILY Concanavalin A-like lectins/glucanases 310 510 IPR013320 -
Arst6g03895 522 Gene3D Glycosyl hydrolase domain; family 43 1 321 IPR023296 -
Arst6g03895 522 SMART glyco_32 1 468 IPR001362 GO:0004553|GO:0005975
Arst6g03895 522 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 513 - -
Arst6g03895 522 CDD GH32_Fruct1-like 1 299 - -
Arst6g03895 522 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 322 508 - -
Arst6g03895 522 SUPERFAMILY Arabinanase/levansucrase/invertase 1 311 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03895 Arst-Chr6 107227722 107230897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03895 1 513 Glycoside Hydrolase AT1G55120 57.280 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03895 K01193 - gmx:100777487 846.269