Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03876 ATGAAGCTTTGGTGCTTTCTATGCTTCAACGAAGAAGAAGAGGTAGAAGATAAAAAGAGTGATAACAATCTAATGAAGCGTAACGAAGAGGACATCTTCAGAAACGACGACGTCGTTTCGGGGACGGCGATTCCTGTCGACGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAGGGAGAAGACGGCGTTTACGACGATGCCGCCGCTGCTCTCGTTTTTGGAAATGACAACGACGAACGACCTGCTGTGCCGGTTTCCGGTGAGCTATTCCGGTTGTTCGAGGGCTATGGGTTCGGTTCATGGGCCGGTCCGCGCCGGTCCGAGGGAGAGAGCAGCTCCGGTTCTTCTGCTGCTCCCACCGGTTCGGAGAGCCACAAGCGGCCCAAGGTTTACGCTGATTTCGGTGAATGTCATTATGCAACCTCTGCGTCTTTGAATACTGGGAAGTCCACTGCATCTGCTGACTATGGAGATTATGATTATCTTCAAGGCTCGTCTCTTCAACCGACCAGTGATGTATGTTATGATGATTTTACATTGATGTGTACTGGTGAGGAGAATGGCTTTAATGCTAGCTGCGCGAAAGACGGCGAAGGAGACGATAGTGACATTTCAAAGGGAGAAGACCTAGAAGTCAGGATGGATCTCACAGATGACTTGCTGCATATGGTGTTCTCATTTTTGGATCATCCCAACCTTTGCAAAGCTGCCAGAGTTTGTAAGCAGTGGCGAGTTGCTAGTGCTCACGAAGACTTCTGGAAGAGTTTGAATTTTGAAGATCGGAATATATCTGTAGAACAATTTGAAGACATGTGTAGGCGGTATCCAAATGCTACAGCAATGAGCATATCTGGTCCAACTATTTACTTGCTGGTCATGAAAGCTATCTCTTCATTGCGGAATCTTGAGGTGCTAACCTTAGGAAGAGGACAGATAGCAGATACTTTTTTTCATGCGTTAGGTGATTGTTCTATGTTGAAGAGATTGAATATCAATGATTCTACACTTGGAAATGGCATTCAGGAGATATCTATTAACCATGAGAGATTGTGCCATATTCAGTTAACCAAATGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAGCTAGAAACCATGTCACTGAAGCGTAGTAACATGGCACAGGTGGTTCTTAATTGCCCTTTGTTGCATGAGCTTGATATAGGTTCTTGTCATAAACTTCCTGATGCTGCAATTCGAGCGGCTGCGACTTCATGCCCACAACTAGCGTCTCTAGACATGTCTAATTGTTCGTGTGTTAGTGATGAAACTCTGCGTGAAATAGCACTGAGTTGTGCTAACCTTAGTTTTCTTGATGCATCATATTGCCCAAATATATCTTTGGAGTCGGTTAGACTGCCAATGTTGACTGTTTTGAAGCTTCACAGCTGCGAGGGAATCACTTCAGCCTCAATGGCTGCAATAGCTCATAGTTATATGTTGGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCAGTGTCTTTGGATCTACCACGTTTGCAGAATATTAGACTGGTACACTGTCGCAAATTTGTTGACTTGAACTTGAGGACACTAATGTTGTCTTCTATACTGGTGTCCAACTGCCCTGCGCTTCACTGTATCAACATCACTTCAGATTCACTAAAAGAATTAAAATTGCAAAAGCAGGATAGTTTGACAACATTAGCTCTGCAATGCCAGTCATTGCAAGAAGTGGACCTTTCTGAGTGTGAATCTTTGACGAATTCAATTTGTGATGTTTTTAGTGATGGTGGAGGTTGTCCTATGTTGAAATCATTAGTTCTTGATAATTGTGAGAGTTTAACATCAGTCCGATTCAACAGCACCTCGTTAGTGAGTCTTTCTCTCGGTGGATGTCGTGCAATTACTACCCTTGAGCTTAAATGTCCTAAGCTTGAGAAGGTTATTTTAGATGGTTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGGTCTCTCAATTTAGGAATATGTCCAAAATTGAACATTCTCAGCATTGAAGCATCGTCGATGGTCTCACTTGAGCTGAAAGGTTGTGGTGTACTATCTGAGGCATCCATTAATTGTCCTCTCTTGACATCTCTGGATGCTTCCTTTTGCAGCCAACTCACAGATGCCTGCTTGTCTGCTACAACTGCTTCATGCTCCCTGATTGAGTCACTAATATTGATGTCTTGCCCATCGATTGGTTTACGTGGTCTCCGTTCTCTGCAGTTTCTTCCAAATTTGACTCTCCTCGATTTATCGTACACTTTCTTGGTCGACTTGCAGCCTGTTTTTGAGTCTTGTTCACAGCTAAAGGTATTGAAGTTGCAGGCGTGCAAATATCTCCCAGATTCATCCCTTGAACCTCTTTACAAGGGGGGTGCTTTACCAGCACTACAAGAGTTGGACCTGTCATATGGAACCCTGTGTCAGTCTGCTATCGAAGAGCTTCTTTCTTGCTGCACACACCTTACACGTGTAAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGATCCAGTCTTGGGGAGATTGCCGAAATGACTGGTGTGAAGATCCTATCCCATCCAAGTTCCTCTGCGATTGTCCACGAGTCAAGTGGGCAACCCACACGGTTACTGCAGAATCTCAACTGTGTCGGATGTCCAAATATCAGGAAAGTGTTCATTCCATTGGCAGCACATTGTGCCAATTTATTATACCTGAACCTCTCTCTCTCAACTAATTTGAAGGAGGTTGATGTTGCTTGTCTGAACCTATGCTGGCTTAATTTAAGTAATTGTGCTGCTTTGGAAGTTTTGAAGCTAGAGTGCCCAAGATTGGCCAGCCTATTCCTTCAGTCTTGCAATATTGATGAGAAAGCTGTTGAAGCCGCTATTGCTAGATGCACTATGCTGGAAACTCTTGATGTTCGCTTCTGTCCAAAGATAAGCTCAATGAGCATGGCTAGATTACGTGCTGCTTGTGCTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTTCATGA 3054 0.4401 MKLWCFLCFNEEEEVEDKKSDNNLMKRNEEDIFRNDDVVSGTAIPVDEEEEEEEEEEEEEEEEGEDGVYDDAAAALVFGNDNDERPAVPVSGELFRLFEGYGFGSWAGPRRSEGESSSGSSAAPTGSESHKRPKVYADFGECHYATSASLNTGKSTASADYGDYDYLQGSSLQPTSDVCYDDFTLMCTGEENGFNASCAKDGEGDDSDISKGEDLEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRVASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAMSISGPTIYLLVMKAISSLRNLEVLTLGRGQIADTFFHALGDCSMLKRLNINDSTLGNGIQEISINHERLCHIQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLASLDMSNCSCVSDETLREIALSCANLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFVDLNLRTLMLSSILVSNCPALHCINITSDSLKELKLQKQDSLTTLALQCQSLQEVDLSECESLTNSICDVFSDGGGCPMLKSLVLDNCESLTSVRFNSTSLVSLSLGGCRAITTLELKCPKLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNILSIEASSMVSLELKGCGVLSEASINCPLLTSLDASFCSQLTDACLSATTASCSLIESLILMSCPSIGLRGLRSLQFLPNLTLLDLSYTFLVDLQPVFESCSQLKVLKLQACKYLPDSSLEPLYKGGALPALQELDLSYGTLCQSAIEELLSCCTHLTRVSLNGCVNMHDLNWGSSLGEIAEMTGVKILSHPSSSAIVHESSGQPTRLLQNLNCVGCPNIRKVFIPLAAHCANLLYLNLSLSTNLKEVDVACLNLCWLNLSNCAALEVLKLECPRLASLFLQSCNIDEKAVEAAIARCTMLETLDVRFCPKISSMSMARLRAACASLKRIFSSLSTS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03876 1017 ProSiteProfiles F-box domain profile. 215 261 IPR001810 GO:0005515
Arst6g03876 1017 SUPERFAMILY RNI-like 773 1010 - -
Arst6g03876 1017 SUPERFAMILY RNI-like 242 508 - -
Arst6g03876 1017 PANTHER OS10G0396666 PROTEIN 198 1017 - -
Arst6g03876 1017 Gene3D Ribonuclease Inhibitor 774 854 IPR032675 -
Arst6g03876 1017 Gene3D Ribonuclease Inhibitor 621 773 IPR032675 -
Arst6g03876 1017 Gene3D Ribonuclease Inhibitor 464 620 IPR032675 -
Arst6g03876 1017 Gene3D Ribonuclease Inhibitor 862 1015 IPR032675 -
Arst6g03876 1017 Gene3D Ribonuclease Inhibitor 215 463 IPR032675 -
Arst6g03876 1017 FunFam F-box/LRR-repeat protein 15 774 859 - -
Arst6g03876 1017 Pfam F-box-like 223 263 IPR001810 GO:0005515
Arst6g03876 1017 MobiDBLite consensus disorder prediction 108 132 - -
Arst6g03876 1017 MobiDBLite consensus disorder prediction 32 71 - -
Arst6g03876 1017 MobiDBLite consensus disorder prediction 111 127 - -
Arst6g03876 1017 MobiDBLite consensus disorder prediction 43 69 - -
Arst6g03876 1017 FunFam F-box/LRR-repeat protein 15 213 462 - -
Arst6g03876 1017 FunFam F-box/LRR-repeat protein 15 isoform C 870 1013 - -
Arst6g03876 1017 SMART LRR_CC_2 733 758 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 978 1003 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 644 669 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 465 490 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 511 536 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 781 806 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 574 598 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 953 977 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 392 417 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 602 632 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 707 732 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 834 863 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 418 443 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 911 936 IPR006553 -
Arst6g03876 1017 SMART LRR_CC_2 328 351 IPR006553 -
Arst6g03876 1017 SUPERFAMILY F-box domain 220 250 IPR036047 GO:0005515
Arst6g03876 1017 SUPERFAMILY RNI-like 501 798 - -
Arst6g03876 1017 CDD F-box_FBXO41 223 262 - -
Arst6g03876 1017 FunFam F-box/LRR-repeat protein 15 464 623 - -
Arst6g03876 1017 Coils Coil 46 66 - -
Arst6g03876 1017 SMART fbox_2 221 261 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03876 Arst-Chr6 107020963 107027690 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03876 - - gmx:100782842 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03876 6 107020963 107027690 Arst6g03876 6 107020963 107027690 ECH