Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03866 ATGGGTGAGGCTCCTCAACTTCTCTATGTTAATGGTTTTTCAAAATTTTGCCATGAAACTCAACAAACCCATGGCAATGGTATTCATGATTCCTCATCATGGTATGAGGAAGTCATTGATGATGATCTCAAAATAACTTCATCAACCATTTTTTTTTTAATCTTCAACAGGGTCCTCCACAAAGGGGTTAGCAAGTACCAAGACATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCTTTGATGATTGATGGAAAGATGCAGAGTGCTGAATCAGATGAGTTTATTTATCATGAATGCTTGATTCATCCCTCCCTTTTATGCCACCCCAACCCCAAAAAGGTGTTTATTATGGGAGGAGGTGAAGGTTCTGCTGCTAGGGAAGCCCTCAAACATAAGACAATAGACAAAGTTGTCATGTGCGACATAGACCAGGAGGTGGTAGATTTCTGTAGGAAATATTTGACTGTGAATAGGGAGACATTTTATCACAGGAAGCTTGACCTTGTCATCAATGATGCCAAGGCTGAGTTGGAGAAGAGAAAGGAAAAGTATGATGTGATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTTTATGAGAAAATCTTGAAGCCCAAGCTCAATGATCATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGTATATTCACACACAAGGAGGTCTTCACTTCCATATATAACACAATCAAACAGGTCTTCAACTATGTGATGGTATATTCCACTCATGTACCATCTTTTGCTGATACATGGGGATGGGTTATGGCTTCTGATGAACCATTATCAATTGGTGCTGAGGAAATGGACAAAAGAATCAAAGCAAGGATAGATGGAGAATTGCTTTATTTAAATGGTGCTTGGTTCCAATCAGCTGCTACCATGAATAAGACTGTTTCACAATCGTTGAAGAACGAAAGTCACGTGTACACAGAAGAAAATGCTAGATTTATTCCTGGGCATGGTGTGGCTTATCGTCTCTAA 1032 0.4041 MGEAPQLLYVNGFSKFCHETQQTHGNGIHDSSSWYEEVIDDDLKITSSTIFFLIFNRVLHKGVSKYQDIALLDTKRFGKALMIDGKMQSAESDEFIYHECLIHPSLLCHPNPKKVFIMGGGEGSAAREALKHKTIDKVVMCDIDQEVVDFCRKYLTVNRETFYHRKLDLVINDAKAELEKRKEKYDVIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDHGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFNYVMVYSTHVPSFADTWGWVMASDEPLSIGAEEMDKRIKARIDGELLYLNGAWFQSAATMNKTVSQSLKNESHVYTEENARFIPGHGVAYRL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03866 343 Pfam Spermidine synthase tetramerisation domain 56 91 IPR035246 -
Arst6g03866 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 319 IPR029063 -
Arst6g03866 343 Hamap Polyamine aminopropyltransferase [speE]. 33 320 IPR001045 GO:0003824
Arst6g03866 343 Gene3D Spermidine synthase, tetramerisation domain 32 90 IPR037163 -
Arst6g03866 343 Pfam Spermine/spermidine synthase domain 94 272 - -
Arst6g03866 343 Gene3D Vaccinia Virus protein VP39 91 342 IPR029063 -
Arst6g03866 343 FunFam Polyamine aminopropyltransferase 91 338 - -
Arst6g03866 343 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 31 330 - -
Arst6g03866 343 NCBIfam fused MFS/spermidine synthase 111 266 - -
Arst6g03866 343 CDD AdoMet_MTases 119 227 - -
Arst6g03866 343 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 32 275 IPR030374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03866 Arst-Chr6 106919564 106924599 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03866 K18787 - gmx:100784972 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03866 6 106919564 106924599 Arst6g03866 6 106919564 106924599 ECH