Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03742 ATGACAACAAGCATGGTCACATTTTTCACAACCCTTTTGGTTATACTCATGAGTTTCCAAACTGAATCATTGCAACATCCAATGCCATCGCCATATTATTCAGGATCAGTTAAAGCTGGATATTGGCCTTCAGGTAATTCTCTCTCACCTTCTTCCATTGACACAAGGTACTTCACACACATCTACTATGCCTTTGTAGAGCCAGAACCAAACACCTTCAACCTCATAATCACATCCTCCGACCAAAACTACATACCTCAATTCATCAATGGTTTAAGCAGCCGGAACCCTCCCGTCAAGACCATATTGTCCATCGGAGGGGGTTCCAGCAATGCTACCTTATTCTCTTTGATGGCTAGCACGGTAAAAAACCGTGCAGCCTTCATAAACTCCACAATCCAAGTGGCCCGTCAATATGGTTTTGACGGACTAGACTTGGATTGGGAGTTCCCTCAAAATGAGCAAGACATGGCAAACCTTGCTTTGTTGTTCAAAGAATGGCACCAGGCTGTGGTTTTGGAAGCCAAGGTTCATAGAAGGCCACGTTTGCTGTTGACCGCAGCTGTGTACTATGCTCACACAATAGTACTTATTGGGCCTAGCCGAAGGTCTTATCCGGCCCAAGCTATTAAAGATTACTTGGATTGGGCCAGCCCTATGTGCTTTGATTACCATGGTGCATGGTCCAATTTCACTGGCTACAATAATGCTTTATTTGATCCTAAGTCCAATATAAGCACCCAATTTGGTCTCGGATCTTGGATCCAGTCCGGCGTTCCGCCCTCAAAGCTGGTTTTTGGGTTACCGCTTTACGGGCGAGCGTGGAAGCTCCAAGATCCGAAAGTTCATGGGGACGGAGCGCCCGCAGTTGGAGCAGCCGATGGCACGGATGGTACTATGAATTATAATGATATCTTGGAATTTAATAAAAAGAATAAGGCTACAGTTGTGTTTGATAGGTCAGCTGTGTCTTATTACACTTATGCTGGCACTACTTGGATGAGCTATGATGATGCACCTTCCATGACAAGGAAGGTTCAATATGCTAAGTCTTTGGGATTGAAAGGATATTTCTTTTGGCAAGTTGGAGGCGATAGGAGTTGGACTATGTCAAGACAAGCTTCAAGTTCGTGGGGACACTGA 1143 0.4497 MTTSMVTFFTTLLVILMSFQTESLQHPMPSPYYSGSVKAGYWPSGNSLSPSSIDTRYFTHIYYAFVEPEPNTFNLIITSSDQNYIPQFINGLSSRNPPVKTILSIGGGSSNATLFSLMASTVKNRAAFINSTIQVARQYGFDGLDLDWEFPQNEQDMANLALLFKEWHQAVVLEAKVHRRPRLLLTAAVYYAHTIVLIGPSRRSYPAQAIKDYLDWASPMCFDYHGAWSNFTGYNNALFDPKSNISTQFGLGSWIQSGVPPSKLVFGLPLYGRAWKLQDPKVHGDGAPAVGAADGTDGTMNYNDILEFNKKNKATVVFDRSAVSYYTYAGTTWMSYDDAPSMTRKVQYAKSLGLKGYFFWQVGGDRSWTMSRQASSSWGH 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03742 380 SMART 2g34 36 365 IPR011583 GO:0008061
Arst6g03742 380 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 141 149 IPR001579 GO:0004553|GO:0005975
Arst6g03742 380 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 36 380 IPR001223 GO:0005975
Arst6g03742 380 PANTHER CHITINASE 37 378 - -
Arst6g03742 380 SUPERFAMILY Chitinase insertion domain 271 336 IPR029070 -
Arst6g03742 380 Pfam Glycosyl hydrolases family 18 39 365 IPR001223 GO:0005975
Arst6g03742 380 SUPERFAMILY (Trans)glycosidases 36 369 IPR017853 -
Arst6g03742 380 Gene3D Glycosidases 51 366 - -
Arst6g03742 380 Gene3D - 270 336 IPR029070 -
Arst6g03742 380 CDD GH18_plant_chitinase_class_V 37 371 - -
Arst6g03742 380 FunFam Class V chitinase CHIT5b 270 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03742 Arst-Chr6 105580697 105582145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03742 7 378 Glycoside Hydrolase AT4G19810 42.246 1.21e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03742 K01183 - gmx:100787511 521.931