Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03690 ATGGCTTTGAACACTACCAAGCTTTTTGCCACAATTCTTGTTGTGTCACTCCTTTCAACACCTTTATTAACCAATGCATGTGGATCATGCAAGGCACCAACTCCGCCACCACCAAAAGCAAAATGCCCCAAAGACACATTGAAATTAGGTGTTTGTGCTGATGTCTTAGGACTTGTTAACGTTATTGTTGGTTCCCCAGCTTCAAGCAAGTGTTGTGCATTGCTTCAAGGCTTGGTTGATTTGGAAGCAGCACTTTGTTTGTGCACCGCTATTAAGGCCAATGTTCTTGGCATCAACTTAGATATCCCTCTCACTCTCAGCTTGCTCCTCAGTGCTTGTCAAAAATCACTTCCTTCTGGCTTCCAATGTTAA 372 0.4328 MALNTTKLFATILVVSLLSTPLLTNACGSCKAPTPPPPKAKCPKDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLVDLEAALCLCTAIKANVLGINLDIPLTLSLLLSACQKSLPSGFQC 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03690 123 CDD HPS_like 45 123 IPR027923 -
Arst6g03690 123 SMART aai_6 42 123 IPR016140 -
Arst6g03690 123 FunFam pEARLI1-like lipid transfer protein 1 40 123 - -
Arst6g03690 123 Gene3D - 42 123 IPR036312 -
Arst6g03690 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 45 123 IPR036312 -
Arst6g03690 123 PANTHER - 9 123 - -
Arst6g03690 123 Pfam Hydrophobic seed protein 42 123 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03690 Arst-Chr6 104854586 104854957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03690 16 123 Acyl Lipid Metabolism Gene Families AT4G22490 37.963 8.82e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03690 - - aip:107605374 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03690 6 104854586 104854957 Arst6g03690 6 104854586 104854957 ECH
Arst6g03690 6 104854586 104854957 Arst8g03533 8 45988666 45989998 PCT