Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03675 ATGGCACACACTAGCTTAATAATGCCGAACCCTAACCACGCTTCCTCTCCTTCTCGATCACCCTTGTCGATTCAATTCTCTTCGATCCCAACCATGGACCGCATTTTCTCCAGTAAGAGTTTCCTTTATAATAGGCTTCGATCTCAGCCTCTCAGCCTTACTGTTCTCAAATTGGATGGATCTACCTTCGATATTCAAGTTGAGAAGACAGCAACTATTGCTGAGCTTAAGGAGGCGGTGAAGGTGGTGTTCAGTCACATGCCTCAGAAGGGGCCAGGGAAGATTTCATGGCCACATGTTTGGCGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTTGTTAAAGATGATGATTACCTGAGAAATTATGGCATCAAGGACGGTGATCAGCTTCGTTTCATCCGCCATGTCTCAAACTATTATAGTGCTCGAAGAAGAAAGCGATCAAAGAAACGAGTTTTCCATTTTAAACAGCACAGCAGGTCATCCTCGCAAGTGAATAGTTATCAACCTAAAGAACATAGTGATGATGATGAAGAAGAAGAAATTTGTTCCGATGAGGTAGCCACTGAGGATAGGAAGATCGAGCTGTACAATAAAGTACGAGTTCATGTTGGAAAGAACAAGTTAACCAGCTTTGGCAGAGTTATTCTCATACAACAGGCTGCCCATTGTACCGAAAACGAGAACTCAAAGTAG 699 0.4335 MAHTSLIMPNPNHASSPSRSPLSIQFSSIPTMDRIFSSKSFLYNRLRSQPLSLTVLKLDGSTFDIQVEKTATIAELKEAVKVVFSHMPQKGPGKISWPHVWRQFCLCYDGQKLVKDDDYLRNYGIKDGDQLRFIRHVSNYYSARRRKRSKKRVFHFKQHSRSSSQVNSYQPKEHSDDDEEEEICSDEVATEDRKIELYNKVRVHVGKNKLTSFVXRVILIQQAAHCTENENSK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03675 233 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 12 216 IPR039690 GO:0000398|GO:0005689
Arst6g03675 233 MobiDBLite consensus disorder prediction 164 183 - -
Arst6g03675 233 SUPERFAMILY Ubiquitin-like 48 140 IPR029071 -
Arst6g03675 233 CDD Ubl_SNRNP25 51 136 IPR040610 -
Arst6g03675 233 SMART ubq_7 51 136 IPR000626 GO:0005515
Arst6g03675 233 Pfam Ubiquitin-like domain 52 137 IPR040610 -
Arst6g03675 233 Gene3D - 45 144 - -
Arst6g03675 233 ProSiteProfiles Ubiquitin domain profile. 51 134 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03675 Arst-Chr6 104754802 104758460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03675 - - adu:107495399 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03675 6 104754802 104758460 Arst6g03675 6 104754802 104758460 ECH
Arst8g03517 8 45833245 45834177 Arst6g03675 6 104754802 104758460 ECH
Arst6g03675 6 104754802 104758460 Arst8g03517 8 45833245 45834177 PCT