Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03604 ATGCTCTTCCACAACCCCCTTCGTCACTCACTATCTCTCTTACTTTCCACACTCAAACAAAAACCCACTCCTACATTCTCATTCTCCCTTCTTCATCACCGTCACCGCTTCTCTTCTTCCTGGCTCTCCGTTCGCGGAAACCCCCTCATTAAATGGCCAACCCTGCCAATCCCTCAACCCCCTCCCAATCCCAATCCCGAACCCCAATCCTCCGAACCCCAACCCCACTCCAATTTCTCGCCGCGCGATTTCTCCGCAATTGCCGATATATTCGCCGACTCTTCCATCTCTCCCGGATCGCTCCTCCATGCGGAACGACGCTCCGGGATTGAACCGGGTTCAGAGCTACTGCTCGCCGTGTTTGACCGTTTCGGTTCGTCGCCCAAGCTGCTTCACTCGCTGTTCCTGTGGGCCGAGAAGCAACCCGGGTTCAGACCTAATTCGAAGCTCTTCGACGCTGTGGTCAACGCTCTCGCTAAGTCCAGGGAGTTTGACTCCGCTTGGACGCTGATTCTTCATCAGATCGATGATGGAAACGACGAGGGAGAAGCTTTGGTTTCCGTTGCCACCTTCGCTATCATGATTCGACGCTATGCACGTGCAGGTATGGTGCAACCTGCAATTCGTACATTTGAGTTTGGAAGAAAGCACAATTCAATTATAGATTCTGGATCGGAATCGAGTTTATTTGAGATATTGTTGGATTCACTTTGCAAAGAAGGGTCTGTTAGGGCAGCTTACGAGTATTTATGTCTAAGAAAGAAGATGACCCAGGGTTGGGTTCCTTCCATTCGGGCTTATAACATAATGTTAAATGGATGGTTTCGGTCAAGGAAACTCAAACACGGTGAGAGACTTTGGGAGGAGATGAAGAAGGAGAATGTAAGACCAACTGTTGTGACATATGGTACCCTTATCGAAGGGTATTGTCGGATGCGTCGAGTTGAAAAGGCGCTCGAGATCGTTGGTGACATGATCAAAGAAGGAATTGCACCAAATGCAATAGTGTATAATCCAATAATTGATGCATTGGCAGAAGCTGGGAGATTTAAAGAGGCCTTGGGGATGATGGAACGATTTCATGTTTTAGAAATTGGCCCTACCGAATCGACATATAATTCTCTGGTAAAGGGGTTTTGTAAGGCAGGAGATCTTGTAGGTGCTAGTAAGATTCTTAAAATGATGATAAGTAGGGGTTTCATTCCAAGCTCCACCACCTATAATTACTTCTTTAGGTACTTCTCAAGATGCGGGAAGATTGAGGAAGGGATGAACTTGTATACCAAGATCATCCAATCCGGTTATACGCCTGATCGGCTAACATACCATCTTTTGGTGAAGATGTTATGTGAAGAGGAAAGGTTAGACTTGGCAGTTCGAGTTAGCAAGGAAATGAGACATAAAGGATTGGACATGGACTTGGCTACAAGTACCATGTTAGTTCATTTGCTATGCAAAATGCGTAGGTTGGAAGAGGCTTTTGCTGAATTCGAGGACATGATACGAAGGGGTATAGTTCCTCAGTACCTTACTTTCCAGAGACTGAATGCGGAGTTAAAGAAACAGGGTATGACTGAAGTGGCACAAAAGCTTTGCAATTTGATGTCTTCCATTCCCCATTCTACCAGCTTGCCAAATACCTACAGTGAAGACAACAATGATGCGCGTGCAAGAAGGAATTCTATAATTCAGAAGGCCCAGGCATTTTCTGATATGTTGAAAAACTGTAACGACCCTCGAGAACTCGAAAAGTATAAATGTTCTTCTGAAAATGATGTCTCAAGTGCGAACGGTTTGATAGAGGATATTGAGAGAAAGATAAGTGCCAAACGAACATCTTCTGTGATTTGA 1851 0.4549 MLFHNPLRHSLSLLLSTLKQKPTPTFSFSLLHHRHRFSSSWLSVRGNPLIKWPTLPIPQPPPNPNPEPQSSEPQPHSNFSPRDFSAIADIFADSSISPGSLLHAELXRSGIEPGSELLLAVFDRFGSSPKLLHSLFLWAEKQPGFRPNSKLFDAVVNALAKSREFDSAWTLILHQIDDGNDEGEALVSVATFAIMIRRYARAGMVQPAIRTFEFGRKHNSIIDSGSESSLFEILLDSLCKEGSVRAAYEYLCLRKKMTQGWVPSIRAYNIMLNGWFRSRKLKHGERLWEEMKKENVRPTVVTYGTLIEGYCRMRRVEKALEIVGDMIKEGIAPNAIVYNPIIDALAEAGRFKEALGMMERFHVLEIGPTESTYNSLVKGFCKAGDLVGASKILKMMISRGFIPSSTTYNYFFRYFSRCGKIEEGMNLYTKIIQSGYTPDRLTYHLLVKMLCEEERLDLAVRVSKEMRHKGLDMDLATSTMLVHLLCKMRRLEEAFAEFEDMIRRGIVPQYLTFQRLNAELKKQGMTEVAQKLCNLMSSIPHSTSLPNTYSEDNNDARARRNSIIQKAQAFSDMLKNCNDPRELEKYKCSSENDVSSANGLIEDIERKISAKRTSSVI 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03604 617 Gene3D Tetratricopeptide repeat domain 416 578 IPR011990 GO:0005515
Arst6g03604 617 Gene3D Tetratricopeptide repeat domain 115 252 IPR011990 GO:0005515
Arst6g03604 617 MobiDBLite consensus disorder prediction 53 71 - -
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 264 298 IPR002885 -
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 334 368 IPR002885 -
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 404 438 IPR002885 -
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 299 333 IPR002885 -
Arst6g03604 617 NCBIfam pentatricopeptide repeat 336 369 IPR002885 -
Arst6g03604 617 NCBIfam pentatricopeptide repeat 407 439 IPR002885 -
Arst6g03604 617 NCBIfam pentatricopeptide repeat 267 299 IPR002885 -
Arst6g03604 617 NCBIfam pentatricopeptide repeat 479 508 IPR002885 -
Arst6g03604 617 NCBIfam pentatricopeptide repeat 372 404 IPR002885 -
Arst6g03604 617 NCBIfam pentatricopeptide repeat 301 335 IPR002885 -
Arst6g03604 617 Gene3D Tetratricopeptide repeat domain 253 396 IPR011990 GO:0005515
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 474 508 IPR002885 -
Arst6g03604 617 Pfam PPR repeat 337 360 IPR002885 -
Arst6g03604 617 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 54 453 - -
Arst6g03604 617 Pfam Pentatricopeptide repeat domain 462 514 IPR002885 -
Arst6g03604 617 Pfam PPR repeat family 263 312 IPR002885 -
Arst6g03604 617 Pfam PPR repeat family 368 413 IPR002885 -
Arst6g03604 617 MobiDBLite consensus disorder prediction 53 82 - -
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 369 403 IPR002885 -
Arst6g03604 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 439 473 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03604 Arst-Chr6 103914041 103917265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03604 144 558 Miscellaneous Gene Families AT4G11690 26.005 3.38e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03604 - - gmx:100793484 858.596