Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03087 ATGTCATACTCAAGGTTCCTCAGCTCAAGTAAAGGCCCTTTGTGGGTTGCAGCTTACTGTTTCAAGCACCTCAAGAAAGCTCAAATCCTTCAGACTCACATTCCTTCCTCTGTTGACAAGATTTTGCAGGATGAAATGAATGCTATCTCCTATAGAGTGCTTGCCTATCTTCTTCTTGGTGTTGTCAGAATATATTCAAAGAAGGCTGAATATTTGTTAGATGATTGCAATGGGATGCTTGTTAGAATCAATAAGTTCGTGATCAAAACAAAAGACAAAGCACCCATGGAAACAATGCGGATGTCTGTTATTATACCAGACAGATTTGAGCTGGATGCTTTTGATCTAGACATACTTGAAGATGCTGGCGGAGGCCATATTGCTTCACAAGAGGAAATTACTCTTAAAGATGTTGTGTGTAGCAATGAGGGATTTGGGCTGTTTTCTCTAGACAAGTTTGAGAAGTTTGATCTTTGTCAAAATATCTGCATTGATGATCATGCTATGTTGGAAGATTTTTGTGAATCACATGAGATGGACGTGGAATATGAATTTTTGCTGCCAAATAGTCCTACTAATTTAATGGAGGACAAGAATATATCTGAAACGAGCATAGTCCATGTGGGTGAGCCAATGAACTTTGACATGGTTTTGTTAGCTGAAGGAGTAGAAAAAGAACCTGTTGACTTATTTGGTCAAGATCAACAAATTAATGAAATTCTGGCAATTCATGAAGCTGCATCATGCGAGGACAAATTACCTGAAGAAAGAAGTAGAATATCTAGAGATGAATGGGTGGATGCCAGTATATTTTCTGGGAGAGTAAAGGAACCTGCGCTATCTGTTGAAGCACTTAATGAATCTCATCAAGTTGATGAAGAACAAAGTATGGTTCTGGAGACATCAAGCTCATTGTGCCAAATGCATAAAGAAAGTACTGAAGTTCATGAAATAAGAAATTTTCAAGAAAATACAAAAATGCCCCAAGAAGATAAATCCCATCAGATAGATTTTTGCATGGACCACAGTAAATCTTCTGTTGCGGAGAAAAACCTTGAAGAAAACACTAAAAGATCTGTTGAAGAGCATGAGAAAGAGAGCAAATTTATGTGTCAAGTAAAGGTTTTACTTGAATGTGAAAAGCTTAAGGTTATTTCAGCGGAGTCAAAAAATCTTGATGCAACACCTCAGTCTAAGCTTCAAGGTAGTTCAGTTAGAAAACAAAAACAAGGAGCTACTTCACCAGAGTTTATGCATATTTCGACACCGGCTTTAAGGGAGCGTGCATCCTTTTCAAGGAAAAGAAAAATTGTTATTGATGGAATGATAGTGGTGCCTAATGAGGTACTTAAAAAAAGTCTCTATGATACAAGTGACTTAATTGCTAACCGCAGAAAATTCCGCCGTACTTTATTGTCTGTGCAGAGAGAATCTCGCATATCCAATCTTTGTGATGGATTCCACAGACCTCTATTTCCTTGTTCTTCCTTAGATCTTTGCTCCTTATTCTCTAAAAGCAAAATATCAAGTTCCCTCAAAATTGTGGAAAATCAAGAGAACTTAGATGTATCAAACTCTCAAACTGTTGGAGATCCAGTGCATACAGCAATAGCTCCACAAACCCCTTGTCAGCGCCCAGTTCCCCTTCAAATTTTGGAAATTCCAGCGAGGTTAGATGTCTCAGAAAATATTGGCAGTCCAGAGCAGATAGAAACTGCACCGAGAACGCCTCCTCAGTTCCAAAAGACAAAACTTAGACCAATTGAGCAACTGGAGAGAAATGAAATTCAACACACTGATAATTTAGAACCTTCAATTCCACATGGAACTAGAGATAGAGAGCAACCTTTGAGAAGGGACGATGAACTCAATCTGATGGAAGAGGTGATAAATTCATGTGAAACGGAGAATTCAAACTTGTTAGCTGGGTGGTCTGATCGAACCAGGAGAGTTGCGAGGTACTTGCACCGGAGTTATCTGGGCCTAAGGAAACAGACACACGAGCAAGTTGTGAATTTTTCACAAGTTTTGGAAGGACGCGTGAGGAAAGAATGCGCAAGGCTCTTTTATGAATTACTGGTTTTGAGGACTACAAGTTATGTGGGTGTCGAGCAAAATAGTGCTTATGGTGACATACTAATGGTTAAACTCCAAAAATTGGATCAAGCTTTTGGACTTATTGACTTGTAA 2190 0.3881 MSYSRFLSSSKGPLWVAAYCFKHLKKAQILQTHIPSSVDKILQDEMNAISYRVLAYLLLGVVRIYSKKAEYLLDDCNGMLVRINKFVIKTKDKAPMETMRMSVIIPDRFELDAFDLDILEDAGGGHIASQEEITLKDVVCSNEGFGLFSLDKFEKFDLCQNICIDDHAMLEDFCESHEMDVEYEFLLPNSPTNLMEDKNISETSIVHVGEPMNFDMVLLAEGVEKEPVDLFGQDQQINEILAIHEAASCEDKLPEERSRISRDEWVDASIFSGRVKEPALSVEALNESHQVDEEQSMVLETSSSLCQMHKESTEVHEIRNFQENTKMPQEDKSHQIDFCMDHSKSSVAEKNLEENTKRSVEEHEKESKFMCQVKVLLECEKLKVISAESKNLDATPQSKLQGSSVRKQKQGATSPEFMHISTPALRERASFSRKRKIVIDGMIVVPNEVLKKSLYDTSDLIANRRKFRRTLLSVQRESRISNLCDGFHRPLFPCSSLDLCSLFSKSKISSSLKIVENQENLDVSNSQTVGDPVHTAIAPQTPCQRPVPLQILEIPARLDVSENIGSPEQIETAPRTPPQFQKTKLRPIEQLERNEIQHTDNLEPSIPHGTRDREQPLRRDDELNLMEEVINSCETENSNLLAGWSDRTRRVARYLHRSYLGLRKQTHEQVVNFSQVLEGRVRKECARLFYELLVLRTTSYVGVEQNSAYGDILMVKLQKLDQAFGLIDL 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03087 729 Pfam N terminus of Rad21 / Rec8 like protein 1 91 IPR006910 GO:0005515
Arst6g03087 729 CDD Rad21_Rec8_M_AtSYN1-like 432 500 - -
Arst6g03087 729 MobiDBLite consensus disorder prediction 395 415 - -
Arst6g03087 729 Pfam Conserved region of Rad21 / Rec8 like protein 667 713 IPR006909 -
Arst6g03087 729 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 720 IPR039781 GO:0007062|GO:0008278
Arst6g03087 729 SUPERFAMILY "Winged helix" DNA-binding domain 647 717 IPR036390 -
Arst6g03087 729 Gene3D Structural maintenance of chromosome 1. Chain E 646 724 IPR023093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03087 Arst-Chr6 96884514 96894600 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03087 K06670 - qsa:O6P43_008829 451.055