Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03074 ATGCACTCAATATATCGTTCTGTTGCCAGCGATTCCGCTAGCCTATGTTGTAAGGTTCTGGTATCTAGAAGTTTCTCTTCACAGTTAGTATCTTCTCACTGTGTAGGAGCTAGAGAGTTTTGGCATGAAGAACAATGTCTAGAGCTTACTAAATATGCTGACATTCTCATTGCAAAAGCTAGCAAAGGGAACAGCGACCGAGAAATTCTCCGGTCTCTTTTCAATGATCCAGCTTGTGATGGTATACATCTATCTCAGAACCTTATTCAAAGGTTACTCCATCGATTTAAAGACGATTGGAGGTCTGCATTGGGGATATTCAAATGGGCAGGTTTGCGATCAGGCTTTAGACACTCGCCGGAATCGTATGATATGATGATAGACATATTAGGGAAAATGAAGCAAATGGAAAAGTTGAGAGATTTCTTGGAAGAAATGCATGAGGTGGGTCTTGTTACTCTGAATACTATAGCTAAGGCGATGAGGAGGTTTGTTGGTGCAGGACAGTGGGAAGATGCAGTAAGGATATTTGATAGCTTAGAATCTCTTGGGTTGGAGAAGAACACCGAATCCATGAACTTGTTGCTTGATACGCTATGCAAAGAGGAATTTGTTGAACAAGCTCGTGAAATTTTCTTGGAGCTAAAGCAGCACATTGCTCCAAATGCTTATACGTTTAACATATTTATACATGGCTGGTGCAAAGTCCGTCGTGTGGATGAGGCACAGTGGACAATCCAAGAGATGAAAGGACATGGTTGTCACCCTTGTGTTATAAGTTACTCAACCATCATCCAATGCTATTGCCAAGAACAGAATTTTGACAGGGTCTACGAGCTGCTTGATGAAATGCAAGCACATGGTTGCTCCCCAAATGTGGTTACTTATACTACCATCATGTCTGCATTGGCGAAGGCAGAAAAATTTGAGGAAGCTTTGCAAGTAGTTGAGAGAATGAGGTCTGTTGGATGCAAACCTGATACCTTATTCTACAATTCATTCATTTACACATTAGGGAGAGCAGGCAAAGTAGATGATGCTATGTTTGTATTCAAGGTGACGATGCCTAATGATGGTGTTGTCCCAAATACATCCACCTATAATTCAATGATTTCTATGTTCTGTCATTATGCACAAGAGAATAGAGCTTTTGATACATTGCGGGAGATGCAAGATGCGGGCCTCTGTAAGCCTGATCTTCAAACTTACCACCCAATGATCAAATTATGCTTTAAAACGGGAAAAATAGATAGTTGGTTGAAGGATATATTGAATGACATGGTCAACAAACATCATCTTGGTCTTGATATCTCTACCTATACACTTCTGATTCATGGGCTCTGTAGAGCAGATAGATACAAGTGGGCATACTCTTTATTTGAGGACATGATTGATCAAGATGTAATGCCTAGATTGAAAACTTGTCGTTTGCTATTGGAAGAAGTCAAACAGAAAAATATGTATGAAGCCTCCGAGAAAATTGAGGACCTTATGAAGAAAATGTAA 1506 0.4011 MHSIYRSVASDSASLCCKVLVSRSFSSQLVSSHCVGAREFWHEEQCLELTKYADILIAKASKGNSDREILRSLFNDPACDGIHLSQNLIQRLLHRFKDDWRSALGIFKWAGLRSGFRHSPESYDMMIDILGKMKQMEKLRDFLEEMHEVGLVTLNTIAKAMRRFVGAGQWEDAVRIFDSLESLGLEKNTESMNLLLDTLCKEEFVEQAREIFLELKQHIAPNAYTFNIFIHGWCKVRRVDEAQWTIQEMKGHGCHPCVISYSTIIQCYCQEQNFDRVYELLDEMQAHGCSPNVVTYTTIMSALAKAEKFEEALQVVERMRSVGCKPDTLFYNSFIYTLGRAGKVDDAMFVFKVTMPNDGVVPNTSTYNSMISMFCHYAQENRAFDTLREMQDAGLCKPDLQTYHPMIKLCFKTGKIDSWLKDILNDMVNKHHLGLDISTYTLLIHGLCRADRYKWAYSLFEDMIDQDVMPRLKTCRLLLEEVKQKNMYEASEKIEDLMKKM 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03074 501 Gene3D Tetratricopeptide repeat domain 82 216 IPR011990 GO:0005515
Arst6g03074 501 Gene3D Tetratricopeptide repeat domain 217 286 IPR011990 GO:0005515
Arst6g03074 501 Gene3D Tetratricopeptide repeat domain 287 354 IPR011990 GO:0005515
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 363 397 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 224 256 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 439 470 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 331 364 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 366 399 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 294 328 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 259 293 IPR002885 -
Arst6g03074 501 NCBIfam pentatricopeptide repeat 122 152 IPR002885 -
Arst6g03074 501 Coils Coil 299 319 - -
Arst6g03074 501 Gene3D Tetratricopeptide repeat domain 355 501 IPR011990 GO:0005515
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 153 IPR002885 -
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 362 IPR002885 -
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 436 470 IPR002885 -
Arst6g03074 501 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 38 375 - -
Arst6g03074 501 Pfam PPR repeat 436 463 IPR002885 -
Arst6g03074 501 Pfam PPR repeat 323 351 IPR002885 -
Arst6g03074 501 Pfam PPR repeat family 256 305 IPR002885 -
Arst6g03074 501 Pfam PPR repeat family 187 235 IPR002885 -
Arst6g03074 501 Pfam PPR repeat family 362 410 IPR002885 -
Arst6g03074 501 Pfam PPR repeat 122 150 IPR002885 -
Arst6g03074 501 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03074 Arst-Chr6 96664243 96667785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03074 161 490 Miscellaneous Gene Families AT4G11690 23.263 1.24e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03074 - - aip:107605030 1003.82