Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02955 TACTTTGTTGCTGCAAATTCTGTAGTGTGTCTCTTCACTCTGTTGACACTCATACTCAACTTTCTGCTGGGACAACAATTACTAATGCGGAGGGACTATTATTTCTATCTATTCACACATGATATGGTGGTGACGGTGCTATTGATGTCTGGATGCGCCGCAGCAACAGCAGTTGGCTATGTGGGTCAGTACGGGCAGGATCATATGGGTTGGCAGCCGCTGTGTGATCATGTTGCCAAGTTCTGCAGATCCACTTTGGTTTCTATTTTGCTCTCTTATTTCTCCTTCTTTTCCTATTTCGCCCTCTCTCTCTTGGAGGCATATTCTTCCATCTCTTCTCCTTTCCCTTCTCCACACTAA 360 0.45 MADPKSHYSMAIQPQQPPSSVTGKHRILITAPNFLRLLSILFSAASIAVMVTSNQTVSLFSLSLEAHFYYSSAFKYFVAANSVVCLFTLLTLILNFLLGQQLLMRRDYYFYLFTHDMVVTVLLMSGCAAATAVGYVGQYGQDHMGWQPLCDHVAKFCRSTLVSILLSYFSFFSYFALSLLEAYSSISSPFPSPH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02955 194 MobiDBLite consensus disorder prediction 1 21 - -
Arst6g02955 194 NCBIfam plant integral membrane protein TIGR01569 35 183 IPR006459 -
Arst6g02955 194 Pfam Casparian strip membrane protein domain 33 172 IPR006702 -
Arst6g02955 194 PANTHER CASP-LIKE PROTEIN 4A4 24 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02955 Arst-Chr6 93847360 93848831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02955 35 178 Miscellaneous Gene Families AT1G79780 26.415 2.05e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02955 - - aip:107647272 270.011