Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02877 ATGGTGAGTGTGGAAGAGATCCGCAACGCTGCGCGTGCGAATGGGCCAGCAACGGTGTTGGCCATTGGCACCGCCACACCTTCCAACTGTGTGTACCAAGACACGTACCCTGACTACTATTTTCGAATCACCAATAGCGAGCACATGACTGATCTTAAAGAAAAGTTCAAGCGAATGTGTGAGAAGTCCATGATCAGGAAGAGGTACATGCACCTAACAGAGGATTTCCTAAAGAAGAATCCCAGCATGTGTGAGTACATGGCGCCATCGTTGGACGCAAGACAGGATATAGTGGTGGTTGAAGTTCCAAAGCTCGGAAAAGAAGCGGCCACCAAAGCCATCAAGGACTGGGGTCAACCCAAATCCAAGATCACCCACCTCGTCTTCTGCACCACCTCCGGCGTCGACATGCCCGGTGCCGACTACCAGCTCACCAAGCTTCTCGGCCTCCGCCCCTCCGTCAAGCGCCTCATGATGTACCAGCAGGGCTGCTTCGCCGGAGGGACGGTCCTTCGACTCGCGAAGGATCTTGCGGAGAACAACAAGAACGCTCGCGTCCTTGTTGTCTGCTCTGAGATCACTGCCGTCACGTTCCGTGGTCCCTCGGACACGCACCTGGATTCCATGGTGGGCCAGGCGTTGTTCGGAGACGGAGCGGCAGCAGTGATCGTAGGAGCCGATCCCGACACCAAAGTGGAACGTCCGTTGTTCGAGATGGTGTCGGCGGCTCAGACGATCTTGCCGGACTCCGAAGGTGCCATCGATGGTCACCTGAGAGAGGTCGGATTAACGTTTCACCTGCTGAAGGATGTTCCGGGGATCATATCAAAGAATATTGAGAAGAGTTTGGTGGAGGCTTTTACTCCCATTGGGATCAGTGATTGGAACTCTATCTTCTGGATAGCGCACCCAGGTGGACCTGCTATATTAGATCAGGTTGAAGCTAAGCTACAACTGAAGGAAGAGAAGCTGAAAGCCACTCGCCACGTGTTGGGAGAGTATGGAAACATGTCAAGTGCATGTGTGCTTTTCATTTTGGATGAGATGAGAAAGAGGTCAATTGAAGAAGGTAAGGCCACCACCGGAGAAGGCTTCGATTGGGGGGTCCTATTCGGGTTCGGACCGGGTCTTACGGTGGAGACGGTGGTGCTTCACAGTCTTCCCTTGGAAAATCGATCTTGA 1182 0.5338 MVSVEEIRNAARANGPATVLAIGTATPSNCVYQDTYPDYYFRITNSEHMTDLKEKFKRMCEKSMIRKRYMHLTEDFLKKNPSMCEYMAPSLDARQDIVVVEVPKLGKEAATKAIKDWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAAVIVGADPDTKVERPLFEMVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGISDWNSIFWIAHPGGPAILDQVEAKLQLKEEKLKATRHVLGEYGNMSSACVLFILDEMRKRSIEEGKATTGEGFDWGVLFGFGPGLTVETVVLHSLPLENRS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02877 393 Coils Coil 310 330 - -
Arst6g02877 393 Pfam Chalcone and stilbene synthases, C-terminal domain 238 388 IPR012328 -
Arst6g02877 393 CDD CHS_like 16 384 - -
Arst6g02877 393 Gene3D - 236 392 IPR016039 GO:0016746
Arst6g02877 393 Gene3D - 1 235 IPR016039 GO:0016746
Arst6g02877 393 PIRSF PKS_III 2 388 IPR011141 GO:0009058|GO:0016747
Arst6g02877 393 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Arst6g02877 393 FunFam Chalcone synthase 2 1 235 - -
Arst6g02877 393 FunFam Chalcone synthase 1 236 388 - -
Arst6g02877 393 SUPERFAMILY Thiolase-like 1 233 IPR016039 GO:0016746
Arst6g02877 393 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 387 IPR011141 GO:0009058|GO:0016747
Arst6g02877 393 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
Arst6g02877 393 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02877 Arst-Chr6 92106762 92111306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02877 105 372 Acyl Lipid Metabolism Gene Families AT1G62640 25.253 5.12e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02877 K00660 - gmx:100775264 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02877 6 92106762 92111306 Arst6g02877 6 92106762 92111306 ECH