Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02796 ATGGGTGCGAGTCGGAAGCTTCAGGGAGAGATCGATCGCGTTCTCAAGAAAGTCCAGGAAGGTGTTGAAGTCTTTGATAGTATCTGGAACAAGGTTTACGACACAGATAATGCCAACCAGAAGGAGAAGTTTGAAGCAGACCTCAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGGGACCAAATTAAGACTTGGATTCAGTCCAGCGAAATCAAGGACAAGAAGGTTAGTGCATCTTATGAGCAAGCTCTAGTGGATGCCCGCAAGTTAATTGAACGTGAAATGGAAAGGTTTAAGATATGTGAAAAGGAGACAAAGACCAAAGCATTCTCTAAGGAAGGCTTAGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAGTTAGAATCTCAGATTGACAACTTTGAAGCTGAGCTTGAAGGGCTTTCTGTCAAGAAAGGAAAGAACAGGCCACCTAGATTGACGCATCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTATTAGACAATGATGAGTTAAGTCCGGAGCAGGTTAATGATGTCAAGGATTTCTTGGATGATTATGTAGAGCGTAATCAGGAGGACTTTGATGAATTCAGCGATGTTGATGAACTATACAGCTCATTGCCTTTAGATAAGGTGGAGACTCTTGAAGATCTTGTTACAATCCCCCCTGGCCTATCTAAGGCTACTCCTAGTCTCAGCTTGAAGAATACTTTGGCTGTTTCAGCATCACAATCAGCATCAGCATCTGCCTCACAAACATCTGAGCAAGCTGATGACACAGCATCCCAGGATAGCAATTCTGATATTGGTGCAAGAACTCCACCTGCGAAAGTTAGTGGAATTATTTCTGCTACTTCCACACCAGCTGGCAACCATGCTACTCCTCTTTCTGTGAATGTTTCTACGCATAATTTGTCCAGTGCACCAGCTGCTGGATCGGTCCTTTCTGGTTCGAATTCAGTTCGGAGTCCCATGGAGAATGCTAATGCTGCGAATTCACCTTCTGCGAATCAATCTTCCTCTTTGAAGGAAGAAGAGATTAATAGTTTCCCTGGCCAGAGACCATCCCCATCGCTTTCTGATGCAGCACTAAGGAGCATTAGCCGAAACAACCTTTCAAATCAAGCAGCAGCTAGCATCCCTCTTGGTGCTGGGAACATGGTTTCTAACAATGGAACCCTTGGGTCAGTCCCTTCAGCCTCTGAAATAACTAAGAGGAACATGTTGGCAGCTGATGATAGACTTGGTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCATTAAGTAATAGCAGATTGATCTTGCCTCAGGTTGGGAAGGCTAATGAAGCTGCCTCAGCTGACTCTAATGTCATTAATGAGGCTGCAGCTGTATCTAGTAGAGTTTTCTCCCCATCTGTGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCATTCCAGAACCAAAGTGATGCGATTCGTCAAAGAACTGAAATAGCTCCAGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAGCAGCAGGGGCACAGCACCCTGCTTACTATGCCTTCTCTTGGAGGAAATCCTAAGCAGTTTTCTGCCCAGCAGCAAAATCCACTTTTGCAACAGTTTAACTCCCAAGGTTCCTCTGTTTCTTCTCAATCTGCTATTGGCCTTGGAGTCCAGTCACCAGGTTTTAGTGGTATTTCAACTACTACACTACAACAGCCACCCAATTCGGTCCATTCCCCATCTAGTCAACAGTCATTGATGTCAGGTGTTTCCAAAGATGCAGATGTTGGCAATTCTAAAATTGAAGATCTACAACATCAGAATTTTCCTGATGATTCAGCTGTTGAATCTACTGGTAGTACTGGGGTTGGCAAGAGTCTCATAAGTGAAGATGATTTGAAATCAACATTTGCTGCAGATTCTCCAGCAGGGGTATCCGTCTCCCTTGCAGAAGCTGGTCAAACATCCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAACCCAATCAACCTACTGGTAACCTTGGTGTCATTGGGAGAAGAAATGGCACGGATCTTGGAGCCATTGGTGATAGTTTCATGGGATCAAGTTCAAGTATTAATCCAAGTGGAGTGCGTGATCAATTATACAATTTGCAAATGCTTGAGGCAGCACACTACAAACTTCCTCTACCCAGAGACTCAGAACGTCCTAGAGCTTATACTCCTAGGCACCCAACGATAACACCTTCTAGTTATCCTCAGACACAGGCTCCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACTGATACATTGTTCTATGCATTTTATTATCAACAGAACACTTACCAGCAGTATTTGGCTGCAAAGGAACTAAAGAAACAGTCCTGGAGATACCACAAAAAGTATAACACATGGTTTCAGCGTCATGAAGAGCCCAAAGTTGCTACAGATGAATATGAGCAAGGAACATACGTATACTTCGATTTCCATATTGCAAATGATGACCTTCAACATGGGTGGTGTCAAAGAATCAAAACTGAATTCACTTTTGAATATAATTATCTTGAAGACGAGCTTCTTGTATAG 2676 0.4346 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVETLEDLVTIPPGLSKATPSLSLKNTLAVSASQSASASASQTSEQADDTASQDSNSDIGARTPPAKVSGIISATSTPAGNHATPLSVNVSTHNLSSAPAAGSVLSGSNSVRSPMENANAANSPSANQSSSLKEEEINSFPGQRPSPSLSDAALRSISRNNLSNQAAASIPLGAGNMVSNNGTLGSVPSASEITKRNMLAADDRLGGSSGMVQPLVSPLSNSRLILPQVGKANEAASADSNVINEAAAVSSRVFSPSVVPGMQWRPGSPFQNQSDAIRQRTEIAPDQREKFLQKYQQVQQQGHSTLLTMPSLGGNPKQFSAQQQNPLLQQFNSQGSSVSSQSAIGLGVQSPGFSGISTTTLQQPPNSVHSPSSQQSLMSGVSKDADVGNSKIEDLQHQNFPDDSAVESTGSTGVGKSLISEDDLKSTFAADSPAGVSVSLAEAGQTSRDIDLSPGQPLQPNQPTGNLGVIGRRNGTDLGAIGDSFMGSSSSINPSGVRDQLYNLQMLEAAHYKLPLPRDSERPRAYTPRHPTITPSSYPQTQAPIVNNPAFWERVGLEPFGTDTLFYAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02796 891 Pfam NOT2 / NOT3 / NOT5 family 748 885 IPR007282 GO:0006355
Arst6g02796 891 Coils Coil 41 61 - -
Arst6g02796 891 Gene3D - 731 886 IPR038635 -
Arst6g02796 891 MobiDBLite consensus disorder prediction 271 298 - -
Arst6g02796 891 Coils Coil 132 159 - -
Arst6g02796 891 MobiDBLite consensus disorder prediction 591 619 - -
Arst6g02796 891 MobiDBLite consensus disorder prediction 110 131 - -
Arst6g02796 891 MobiDBLite consensus disorder prediction 334 386 - -
Arst6g02796 891 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 731 886 - -
Arst6g02796 891 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Arst6g02796 891 MobiDBLite consensus disorder prediction 271 302 - -
Arst6g02796 891 PIRSF NOT_su_3_5 1 891 IPR012270 GO:0006355|GO:0030015
Arst6g02796 891 MobiDBLite consensus disorder prediction 591 621 - -
Arst6g02796 891 PANTHER CCR4 NOT-RELATED 24 888 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02796 Arst-Chr6 88590487 88601141 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02796 K12580 - gmx:100785965 1412.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02796 6 88590487 88601141 Arst6g02796 6 88590487 88601141 ECH