Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02618 ATGTTAGCATGCCCTAGCACTAACACCTTCCATGGTGGAGCCACGCTCCACCACCACCACCACCACCGCCGTTCTCAGCCTCCTTGCTGGTTCCTCCCTTTCCGACCTCACTTTGGCTTTGCTAAGGAAGGAAAATGCCGCTCCCGCTCTCTCTCCCTCCTGTTCTCCGGCAACAACAACCGTAACGGCTTTGCTGTCAGAGCTTCCACGGAACCGTCGGACGATAAGAACAGCGATGGCGCCACACACATTGCGCCGCAACCGTACTCCGTGAAGATTCCTGTTGGCGATAGACATATTGTGTATACTTCTATATGTTTGGATGATGCTGCTAGTGAGCCATCTGATTTTTTTCCTCTTTCTGTGAATTATCAAGAGCGTTTTTCAGCAGCTGGTCGCACTAGTGGAGGGTTTTTCAAGCGAGAAGGAAAGGCAAAAGATCATGAGGTTCTTACTTGTAGATTGATAGATAGGCCTCTTCGTCCTACAATGCCTAAGGGCTTCTACCATGAAACTCAAATACTGTCTTGGGTTTTAAGCTATGACGGATTGCATTCCCCTGATTCCTTGGCGGTCACTGCTGCTGGTATAGCAGTTGCACTTTCAGAAGTTCCAGTATCAGAAGTAGTTGCTGGAGTTCGAGTTGGCCTTGTTGGTGATAAGTATATAGTAAATCCTACAACCGAGGAGATGGAAAAGTCTGAGTTGGACCTTGTGCTGGCTGGAACAGATAGTGCAATATTGATGATTGAGGGCTATAGCAATTTGCTTCCAGAAGAGAAGTTACTTAAAGCTGTAGAAGTTGGTCAGGATGCAGTGCGAGCAATCTGTAAGGAAGTAGAAGCTTTGGTTAAGAAGTGTGGGAAACCAAAGATGTTTGACGCAATCAAGCTACCTCCTCCTGAGCTTTATAAATATGTTGAAGAAATTGCTGGTGATGAGTTGCTAAAAGTTCTTCAAATTAGAAACAAAATACCAAGAAGGAAAGCCATTTCAGCATTAGAAGACAAGGTTCTGAAGATACTTACAGAAAATGGGTTTGTCAGTAATGACCCAACATTAAGGAGTAATGCTGAAACTATCGCGGAGATTCTTGAGGAGGAGGATGAAGATGAGGAAGTGATTGTTGATGGTGAAGTTGATGAAGGTGATGTTCATATAAAGCCAACTTCACCCAGACCAACTCAATTGTTTGCTGAGGTAGATGTAAAGTTGGTATTTAAAGAAGTTTCATCCAAGTTTTTGAGGAAGCGCATTGTAGAGGGGGGAAGACGGAGTGATGGGCGAACACCAAATGGAATACGTCCAATCAATGCAAGATGTGGGCTACTACCTAGAGCACATGGAAGTGCTCTTTTTACAAGAGGCGAAACACAGTCAGTCGCTGTTGTTACTCTTGGAGATAAGCAAATGGCGCAAAGAATAGACAATCTTATAGATGTTGAAGAATACAAGAGGTTCTATCTTCAGTATTCATTTCCTCCTTCAAGTGTTGGGGAAGTTGGCCGAATTGGTGCACCAAGTAGAAGAGAAATTGGACACGGGATGCTTGCAGAGAGATCACTTGAACCAATTTTGCCTCCAGAGGATGATTTCCCTTACACTATACGTGTTGAGAGTACTATCACAGAAAGCAATGGCTCATCAAGCATGGCTTCTGTCTGTGGGGGTTGCTTAGCATTGCAAGATGCTGGGGTTCCTATTAAGTGCTCTATTGCTGGCATTGCCATGGGTTTGGTACTGGACACCAAGGAATTTGGTGGTGATGGAACTCCACTGATTCTGTCCGACATAACTGGATCTGAAGATGCTTCCGGAGATATGGATTTCAAGGTTGCTGGAAACGAAGATGGTATAACTGCATTTCAGATGGACATTAAGGTAGGAGGAATTACTTTGCCCATCATGAGAGAGGCACTCCTACAGGCTAGAGAGGGCAGGAAGCATATACTTGGGGAAATGATGAAATGCTCACCCCCTCCAGCAAAAATTCTTTCCAAGCACGCACCATTAATTCACATAATGAAGGTCCAACCTGAGAGAATAAATCTAATAATTGGTTCTGGTGGAAAAAAAGTGAGGAGCCTTATTGAAGAATCTGGAGTAGAGGCTATTGATACAGAAGATGATGGCACTGTGAAAATAACTGCAAAAGATTTGTCTAGTTTGGAGAGGTCTAAAGCGATGATTAGTAGTTTGACAATGGTTCCAACTATTGGTGATATATATAGGAACTGCGAAATTAAGTCCATAGTTCCATATGGAGCTTTTGTAGAGATAGCACCTGGACGAGAGGGACTGTGCCATGTTAGCGAACTTAGTTCAGGTTGGCTAGCCAAGCCAGAAGATGCTTTCCAAGTGGGAGACCGCATTGATGTAAAGCTTATAGAGATAAATGATAAGGGACATCTGCGACTTAGCCACCGAGCAATGCTTCCTGCTACAGAATCAGAAAATTCAAATAGTCAGCCTACTAGTGAACTCCCCATAGATACTGCAGAATTACAAAAATCAACTGACAAGGGTTCGTCAAAAAAAGTTAATAGCCTGGCAAAAGATGGTTTAGCCGAAGGGAAGAGTAAGCAGCCTAGGGATAAGATTGGCAAAGTCAGAGTCTCATCTAAAAGGAGTTCAGAGGACGATTCTGTAATTCCCTCAAAAAAGTTTATCAGGAAATTGGTTAGCCCTTCCGAGGATAAGCCTTCCATGAACAAAGACGATGTAAAGAGGAGTAACAATGAAGCATTTGGTAGTGTCTCTGGCAAAGATGAAAATAGTTTGGTTAGTGGAGAGGCATGA 2799 0.4362 MLACPSTNTFHGGATLHHHHHHRRSQPPCWFLPFRPHFGFAKEGKCRSRSLSLLFSGNNNRNGFAVRASTEPSDDKNSDGATHIAPQPYSVKIPVGDRHIVYTSICLDDAASEPSDFFPLSVNYQERFSAAGRTSGGFFKREGKAKDHEVLTCRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPVSEVVAGVRVGLVGDKYIVNPTTEEMEKSELDLVLAGTDSAILMIEGYSNLLPEEKLLKAVEVGQDAVRAICKEVEALVKKCGKPKMFDAIKLPPPELYKYVEEIAGDELLKVLQIRNKIPRRKAISALEDKVLKILTENGFVSNDPTLRSNAETIAEILEEEDEDEEVIVDGEVDEGDVHIKPTSPRPTQLFAEVDVKLVFKEVSSKFLRKRIVEGGRRSDGRTPNGIRPINARCGLLPRAHGSALFTRGETQSVAVVTLGDKQMAQRIDNLIDVEEYKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGMLAERSLEPILPPEDDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKCSIAGIAMGLVLDTKEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPIMREALLQAREGRKHILGEMMKCSPPPAKILSKHAPLIHIMKVQPERINLIIGSGGKKVRSLIEESGVEAIDTEDDGTVKITAKDLSSLERSKAMISSLTMVPTIGDIYRNCEIKSIVPYGAFVEIAPGREGLCHVSELSSGWLAKPEDAFQVGDRIDVKLIEINDKGHLRLSHRAMLPATESENSNSQPTSELPIDTAELQKSTDKGSSKKVNSLAKDGLAEGKSKQPRDKIGKVRVSSKRSSEDDSVIPSKKFIRKLVSPSEDKPSMNKDDVKRSNNEAFGSVSGKDENSLVSGEA 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02618 932 FunFam Polyribonucleotide nucleotidyltransferase 667 736 - -
Arst6g02618 932 ProSiteProfiles Type-1 KH domain profile. 670 730 - -
Arst6g02618 932 FunFam Polyribonucleotide nucleotidyltransferase 371 666 - -
Arst6g02618 932 SUPERFAMILY Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 300 430 IPR036456 GO:0003723|GO:0006396
Arst6g02618 932 MobiDBLite consensus disorder prediction 857 912 - -
Arst6g02618 932 Pfam KH domain 675 731 IPR004088 GO:0003723
Arst6g02618 932 SUPERFAMILY Ribosomal protein S5 domain 2-like 100 205 IPR020568 -
Arst6g02618 932 FunFam Polyribonucleotide nucleotidyltransferase 1, chloroplastic 740 811 - -
Arst6g02618 932 Hamap Polyribonucleotide nucleotidyltransferase [pnp]. 64 812 IPR012162 GO:0003723|GO:0004654|GO:0006402
Arst6g02618 932 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 673 759 IPR036612 GO:0003723
Arst6g02618 932 CDD RNase_PH_PNPase_2 434 661 - -
Arst6g02618 932 SUPERFAMILY Ribonuclease PH domain 2-like 209 292 IPR036345 -
Arst6g02618 932 Gene3D - 740 811 IPR012340 -
Arst6g02618 932 SMART kh_6 669 735 IPR004087 GO:0003676
Arst6g02618 932 Pfam 3' exoribonuclease family, domain 1 95 205 IPR001247 -
Arst6g02618 932 Pfam 3' exoribonuclease family, domain 1 434 567 IPR001247 -
Arst6g02618 932 SUPERFAMILY Nucleic acid-binding proteins 733 812 IPR012340 -
Arst6g02618 932 Pfam 3' exoribonuclease family, domain 2 209 271 IPR015847 -
Arst6g02618 932 Gene3D - 88 289 IPR027408 -
Arst6g02618 932 Gene3D K Homology domain, type 1 668 739 IPR036612 GO:0003723
Arst6g02618 932 MobiDBLite consensus disorder prediction 913 932 - -
Arst6g02618 932 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 97 849 IPR012162 GO:0003723|GO:0004654|GO:0006402
Arst6g02618 932 SUPERFAMILY Ribosomal protein S5 domain 2-like 407 579 IPR020568 -
Arst6g02618 932 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 97 849 IPR012162 GO:0003723|GO:0004654|GO:0006402
Arst6g02618 932 CDD S1_PNPase 740 808 - -
Arst6g02618 932 SMART S1_6 738 809 IPR022967 -
Arst6g02618 932 FunFam Polyribonucleotide nucleotidyltransferase 81 294 - -
Arst6g02618 932 Gene3D - 299 667 IPR027408 -
Arst6g02618 932 ProSiteProfiles S1 domain profile. 740 809 IPR003029 GO:0003676
Arst6g02618 932 MobiDBLite consensus disorder prediction 65 85 - -
Arst6g02618 932 Pfam S1 RNA binding domain 747 809 IPR003029 GO:0003676
Arst6g02618 932 CDD KH-I_PNPase 668 737 - -
Arst6g02618 932 NCBIfam polyribonucleotide nucleotidyltransferase 399 810 IPR012162 GO:0003723|GO:0004654|GO:0006402
Arst6g02618 932 SUPERFAMILY Ribonuclease PH domain 2-like 561 662 IPR036345 -
Arst6g02618 932 MobiDBLite consensus disorder prediction 835 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02618 Arst-Chr6 84214434 84241189 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02618 K00962 - qsa:O6P43_006222 1298.88