Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02581 ATGGTTGGGGCCGCCCCACGGTTCCTCTCTCTCCTCACCACAGCTCCCTCCCCTCTCCTCCGCCACCGCCGCCACCTCCTCCTCCTCTCCGCAAACTTCCGCCGCCTCTCCACTCCCTTTTCAACTTTTGCACCCTCTCCTCTGAAACTCAAACCCTCCCAGCACCATCACCATCCACAACCACAACAGCAGCACCAGCAGCAGCAACGCTTTCAAACCGTAGCAGCTTTCTCTCCTTCTTCCGACACCTTTCCTTCCTCAGTTTCACACCCATGGCCCGAGTGGTCCCGCTTCCTCTCCCACCTCACCTCCGCCGGGTACCTCCACCGCCCGCCCCCTGACCTCGGAACCTTCGCGCCGCCCCCTGAGTTGTCGCGCCAATTCGTTGCCGAGGCTGCCGCTTGCTACGCCTTCGCCGCCGATAGACCCAACCTCTTGCGGTTGCTTTCGAAGAGAGACATCGGGGTTGTGGCTGAAAATGGTGTCCCCTTTCTGTTCCGAGATGCAAAGGAATCCATCGCAAAGATGAAAGCTTTCGTGTCAACCAATGATGCCGCCGTATTGGACACTGACAGAGCAACAACGGTTGATCTAATGAAGTTTATGCTTAGTTATGCAAGTAACCCATTGGTTACATCTGAAAGCAATAATCTATCTAACAGAGATATTGTTGAATCATCAGTGAGAAATCTGTTTGGTGAACTTTACAAGCTGAGTTACAGTGCACCTGGGCCCAACTCTTCTGATTCGATGCAAAATCAAATATCTAGTGGATATGGACAGACAATGCCTCCTGGTCGAAACATTGAAATGAAAAGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTCGCAAGAAATGTTAAATGCCGCGAGTGTGAGGAAGCAAGGCCAAAAAGACAATTGACAGGAGGAGAATGGGAATGTCCTCAGTGCGATTTCTATAATTATGGGAGGAATATGACTTGCTTAAGGTGTGATTGCAAGCGACCGGGACAGATATCTTTGGGTCCTGCCAATACCCTGTCAAATATGGGGTATGGAAATGGAGACAATACTAATACTTCAGAGATTGATAGCAGACTAGCTGCTAATGAAGAGAAAGCACGGCGTTGGTTTAGTAAGGTTTCTCAACTAGATAGCAGTGCGGATATTAACAGCTTGATTGGGGATGAAGATTTTCCCGAGATAATGCCATTAAGGAAAGGAGTAAATAGATTTGTTGTGAGCACAAGGAAAACTCCGTTGGAGAGGAGATTGGCTGACGCTCGATACAGGAGAAACTTGGACAATAATGGCATTCCCGGGGTTGAGGATTTTAAATCTGTGGAATCAACCAGGATAAATGATCCTCGATTGTCTTCAGATCTGGCTGCCCAAAAAATTGAGAACATGACAACAGAAAAGAGCGAAACTGATGCTCAGTATGCAGGTACTAGTACAGGTAACAATTCACAACTTTCTAATAATTCTACAAACCAAAATGGCATCATAGATAAGGAGAAAGAGCAAGCTGAAAAATCTGAGCGGTGGTTTAGAAAGGTTGCTGAGTTGCATGATATTTCAGATTCATCAAGCAGGGTATCTGATGAGAACTTCCCTGAAGTAATGCCCATGCGCACAGGAGAAAACCGATTTGTTGTTAGCAAGAAAAAGGATCGATCTTTGACTTCACCTGCATACAAGAGACAATTGGCCATGGAACAATCTGGCAACAATACCAACTTTGTCCCCTTTGTTCCCTTCCCTCCAGATTACTTTGCCAAAAAGGACAAGCAACCGGAAAATGGAGTAGATTCAGTAGATATTTCTTCGAATGCTGAATCATCTTCAATATCTGAAGCGGCAGAGAATCCTCCAAAGATGCCAGATGATGCTAGAGCTAGAGCTGAGTTACGAGGTGCAAACTATTCCCCAGGTTTGACCAATGCTGAAACAATGTCTGGGGTTCCAGAGATGTTAGATAATGCTACACTTGGCCGGGAAAGAAAAGAAAATGTCAGAGAGATTAGAAGACAAGATGAAAACATGAAGAACAGTAGTCTGGAACCTTCTGGACAGCACTCGACTAAAAATGATATTGGTTCCATTTCTGGGGCATTAACTAGTGGAAATTCCAGTTTCAATCAAGAGAATTTCGGGAACAAGAACAGCAATCAAGAGCCAAATTTGACAGGCAGTTTGGAAAACCAGAATAACAGAACACAGTGGACAGGAAAGAGTTTGGAGGGGTCAGCTGTCAAGGAACCAGATCCTTTGGACATGTCAGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGTGTTGCACAGATCAAGGATATCTCTGAGCTCAGTCAGATTCCAGATGAAGATTTTCCTTCGATAATGCCTATGCGTAAAGGCGTGAATAGATTCGTTGTGAGCAAGAGGAAAACGCCGTTGGAAAGGAGGTTGACATCTCAGCAGTACCGAAGAAACCTTCCTGTTGTGAGTTCAGATCCTCTTAAAAAGGAAAATGAAGGTAGCTGA 2514 0.4602 MVGAAPRFLSLLTTAPSPLLRHRRHLLLLSANFRRLSTPFSTFAPSPLKLKPSQHHHHPQPQQQHQQQQRFQTVAAFSPSSDTFPSSVSHPWPEWSRFLSHLTSAGYLHRPPPDLGTFAPPPELSRQFVAEAAACYAFAADRPNLLRLLSKRDIGVVAENGVPFLFRDAKESIAKMKAFVSTNDAAVLDTDRATTVDLMKFMLSYASNPLVTSESNNLSNRDIVESSVRNLFGELYKLSYSAPGPNSSDSMQNQISSGYGQTMPPGRNIEMKRGDWICPRCNFMNFARNVKCRECEEARPKRQLTGGEWECPQCDFYNYGRNMTCLRCDCKRPGQISLGPANTLSNMGYGNGDNTNTSEIDSRLAANEEKARRWFSKVSQLDSSADINSLIGDEDFPEIMPLRKGVNRFVVSTRKTPLERRLADARYRRNLDNNGIPGVEDFKSVESTRINDPRLSSDLAAQKIENMTTEKSETDAQYAGTSTGNNSQLSNNSTNQNGIIDKEKEQAEKSERWFRKVAELHDISDSSSRVSDENFPEVMPMRTGENRFVVSKKKDRSLTSPAYKRQLAMEQSGNNTNFVPFVPFPPDYFAKKDKQPENGVDSVDISSNAESSSISEAAENPPKMPDDARARAELRGANYSPGLTNAETMSGVPEMLDNATLGRERKENVREIRRQDENMKNSSLEPSGQHSTKNDIGSISGALTSGNSSFNQENFGNKNSNQEPNLTGSLENQNNRTQWTGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVSSDPLKKENEGS 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02581 837 Gene3D - 303 335 - -
Arst6g02581 837 Gene3D - 265 302 - -
Arst6g02581 837 MobiDBLite consensus disorder prediction 681 744 - -
Arst6g02581 837 SMART zf_4 274 298 IPR001876 -
Arst6g02581 837 SMART zf_4 307 331 IPR001876 -
Arst6g02581 837 ProSitePatterns Zinc finger RanBP2-type signature. 309 328 IPR001876 -
Arst6g02581 837 MobiDBLite consensus disorder prediction 659 680 - -
Arst6g02581 837 MobiDBLite consensus disorder prediction 47 71 - -
Arst6g02581 837 ProSitePatterns Zinc finger RanBP2-type signature. 276 295 IPR001876 -
Arst6g02581 837 Pfam Zn-finger in Ran binding protein and others 307 333 IPR001876 -
Arst6g02581 837 Pfam Zn-finger in Ran binding protein and others 273 299 IPR001876 -
Arst6g02581 837 MobiDBLite consensus disorder prediction 467 500 - -
Arst6g02581 837 PANTHER ZINC FINGER PROTEIN 47 416 - -
Arst6g02581 837 MobiDBLite consensus disorder prediction 811 837 - -
Arst6g02581 837 MobiDBLite consensus disorder prediction 589 627 - -
Arst6g02581 837 SUPERFAMILY Ran binding protein zinc finger-like 266 301 IPR036443 -
Arst6g02581 837 MobiDBLite consensus disorder prediction 600 618 - -
Arst6g02581 837 ProSiteProfiles Zinc finger RanBP2 type profile. 305 334 IPR001876 -
Arst6g02581 837 MobiDBLite consensus disorder prediction 639 760 - -
Arst6g02581 837 ProSiteProfiles Zinc finger RanBP2 type profile. 272 301 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02581 Arst-Chr6 82385732 82389904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02581 88 338 EF-hand Containing Proteins AT1G55040 33.106 3.76e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02581 - - aip:107604755 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02581 6 82385732 82389904 Arst6g02581 6 82385732 82389904 ECH