Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02402 ATGGGAGAGATGTTGGAGCTGAGCCCGGACGAAGAGAGAATAATGATCAGAGACATTGCCCTCTCTTCTCAATCTAATAGCAAAGAAGGCGACACCTTCTTCTTAATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGATCAGTCAAACAATTCTTATGATGGTTCCTCCTTTTTAGAATATGAGGACTCTAGTACGGGTATTGATATTCATGATACACTTTTAGAAGGTCGTGACTATGTATTACTTCCCCAAGAAGTTTGGAACCAATTATATGCATGGTATGGTGGTGGACCTACATTGCCAAGGAAAGTTATCAGTGCAGGTCTTTCCCAGACAGAGCTGGCCGTAGAGGTGTATCCTCTACGGCTTCAATTACTCATGTTGCCAAGAAATGATCGTACCAGCATAAGAATAAGCAAGAAGGAAACCATTGGACAGCTTCACAGGAAAGCTTGTGAAATATTTGATCTTCCATTGGACCAAGTATGTATTTGGGATTACTATGCCCGCCGGAAGAATGCCTTGATGAATGACATGGACAAAACACTTGATGATGCCAATATACAAATGGACCAAGATATTCTTGTTGAGGTTATCAACAATACGAATGACACATGCTCTGCCCATGAAAATGGGTCTGCGCAGAGGGAAGCAAATTCTGTTCTTGTCGAGCCTTCAAACTCAAATTTATCAATTGCTGGTGGCCTGTCTGCTAGCAGGGTTCCCTCTAGAAGCTATAATGCAGATCTTTCTTCTTCTCAGAACCTAAATCCTCCAGCCAGAGATGCGGAAAATCCTTATGGGAGTGGTGTCACCACACGAGGTTCAGTGAGTGGTCTCACCGGGCTGCTGAATCTTGGCAACACTTGTTTCATGAATAGTGCAATACAGTGTCTTGTCCATACACCAGAGTTTGCTAGGTACTTTCGGGAGGACTATCACCAAGAGATAAATTGGCAAAATCCATTGGGCATGGTTGGTGAGCTAGCCCTAGCCTTTGGTGAGTTGCTTCGTAAACTATGGGCACCTGGGCGAACGCCAATTGCTCCTCGGCCTTTTAAAGCCAAGCTTGCTCGCTTTGCACCTCAGTTCAGTGGGCACAATCAGCACGATTCTCAGGAGCTTTTAGCATTTCTGCTGGATGGTCTTCACGAAGACTTGAATCGTGTTAAACACAAACCATATATAAAGTCTCGAGATGCAGATGGCCGACCAGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCATATTGCTCGCAATGATTCCATAATTGTTGATGTTTGCCAGGGGCAATACAAGTCAACATTGGTTTGTCCAGTTTGCAATAAAGTCTCTGTCACGTTTGATCCTTTTATGTACCTTTCCTTGCCACTCCAGTCAACCAGCAGCAGGACCATGACAGTGACAGTTTTTACTTGTGATGGAACTGCCCTGCCATCTCCTTGTACTGTAACTGTGCCTAAGCAGGGACGCTGCAAAGATCTGATTCAGGCTCTCAGCAATGCTTGCTCACTGAAGCATAACGAGAGACTGTTGCTTGTAGAGGTACGAAACCATTTGATTCATAGATTTCTTGAAGATCCTCTTCAGTTGTTGTCCACTATCAAAGATGATGACCATGTTGCTGTTTACAAGATTCCAAAGATAGAGAAAAACACAAAGTATCTCCAGTTGATCCACCGCCGGAGAGAGCATGACTCGCACACTGTATCAGGATGGAAGCCATATGGAACACCTATTGTGTCATTGATCTCATGTGATGATCCAGTTACAAGAGGCGATATACAAGTGATAGTTAATCGTATGCTCTCTCCACTGTTGAGGAAAAGTGGCAATACAGAGCACACTAATACAGAAACCAGCATCACAAAAGCTGCTGGCGACAATGCTTCTAGCGATGCATATGCTACCAACTTGGTGTCAAATTCAGTAAATAAGGCAGGACGAATGCCAACACTACCCCTTCTTTTGATAGATGAAAGCAATGCTTGCATTGATCTTTCTATGGGAGAGGATAAAGTTGTTAAACTTCCTTCTTCGTCAACACTTCTAGTGTATATTGATTGGTCTCAAAAGCTTCTGGAGAAGTATGATACTCATCCACTTGAGACTTTGCCTGAAGTTTTAAAATACGGGCCCGTGTCCAAGAAAGCTCGTACTGAACCCCTCTCATTGTACACCTGTTTGGAAGCTTTTCTGCGTGAAGAACCTCTGGTGCCTGAAGATATGTGGTACTGTCCCCAATGCAAAGAGAGAAGACAAGCAAGCAAAAAGCTTGACTTGTGGAGGCTCCCAGAGGTTTTGGTCATTCATTTGAAGAGGTTCTCATACAGCAGGTCAATGAAGCATAAACTAGAGACCTTTGTTAACTTCCCGGTTCATGACTTTGACTTAACGAACTATGTAGCCAATAAAAACAATTCTCGGCGTCAGCTGTATGAACTGTATGCCCTCACAAACCATTATGGTAGTATGGGTAGTGGTCATTACACTGCACATATCAAGCTCTTAGATGAAAACAGGTGGTACAATTTTGACGACAGCCACATATCACCCATAAGTGAGGATGATGTGAACACTGCAGCTGCCTATGTTCTATTTTACCGGAGGGTGCGGAGTGACGATGATTCTGTTAGCAATGGGGCCTAG 2667 0.4368 MGEMLELSPDEERIMIRDIALSSQSNSKEGDTFFLITQRWWQHWIEYVNQDQSNNSYDGSSFLEYEDSSTGIDIHDTLLEGRDYVLLPQEVWNQLYAWYGGGPTLPRKVISAGLSQTELAVEVYPLRLQLLMLPRNDRTSIRISKKETIGQLHRKACEIFDLPLDQVCIWDYYARRKNALMNDMDKTLDDANIQMDQDILVEVINNTNDTCSAHENGSAQREANSVLVEPSNSNLSIAGGLSASRVPSRSYNADLSSSQNLNPPARDAENPYGSGVTTRGSVSGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTSSRTMTVTVFTCDGTALPSPCTVTVPKQGRCKDLIQALSNACSLKHNERLLLVEVRNHLIHRFLEDPLQLLSTIKDDDHVAVYKIPKIEKNTKYLQLIHRRREHDSHTVSGWKPYGTPIVSLISCDDPVTRGDIQVIVNRMLSPLLRKSGNTEHTNTETSITKAAGDNASSDAYATNLVSNSVNKAGRMPTLPLLLIDESNACIDLSMGEDKVVKLPSSSTLLVYIDWSQKLLEKYDTHPLETLPEVLKYGPVSKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPVHDFDLTNYVANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHISPISEDDVNTAAAYVLFYRRVRSDDDSVSNGA 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02402 888 CDD Peptidase_C19R 721 875 - -
Arst6g02402 888 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 287 302 IPR018200 GO:0004843|GO:0006511
Arst6g02402 888 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 286 877 IPR028889 -
Arst6g02402 888 Gene3D Cysteine proteinases 696 884 - -
Arst6g02402 888 MobiDBLite consensus disorder prediction 249 265 - -
Arst6g02402 888 SUPERFAMILY Cysteine proteinases 284 877 IPR038765 -
Arst6g02402 888 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 819 836 IPR018200 GO:0004843|GO:0006511
Arst6g02402 888 ProSiteProfiles DUSP domain profile. 7 110 IPR006615 GO:0004843
Arst6g02402 888 SUPERFAMILY DUSP-like 7 110 IPR035927 -
Arst6g02402 888 Pfam DUSP domain 30 110 IPR006615 GO:0004843
Arst6g02402 888 Gene3D - 124 210 - -
Arst6g02402 888 Gene3D Cysteine proteinases 275 514 - -
Arst6g02402 888 MobiDBLite consensus disorder prediction 249 276 - -
Arst6g02402 888 Gene3D - 3 123 IPR035927 -
Arst6g02402 888 SMART dusp 26 113 IPR006615 GO:0004843
Arst6g02402 888 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 216 876 - -
Arst6g02402 888 Pfam Ubiquitin carboxyl-terminal hydrolase 286 874 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02402 Arst-Chr6 75382161 75390556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02402 730 879 Miscellaneous Gene Families AT4G31670 34.641 1.61e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02402 - - gmx:100794067 1551.18