Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02352 ATGGCTCCAGTTGCTAAAAGGTTAGAGGGTAAGGTGGCAATAATCACAGGAGGTGCCGGGGCCATTGGTGCAACCACCGCAAAACTATTCCTTCAACACGGAGCTAAGGTGATCATCGCAGATGTCCAAGACGAACTGGGTATCTCTCTCTGCAAATCCCTCATCACCAAAGACGGTGCCGCTAATAACAACAACAACATCGACTACGTTCACTGTGACGTGACCTCCGAACAAGACGTCAAAAACGCGGTCGATTTGGCTGTTTCCAAATACGGCCACCTTGACATCATGTATAACAATGCCGGCACCGCCGGTGACAATATCAAGCGCCCGATGGAGAACTCCACCGTCGAAGACTTCAAGAGAATCTTCGATGTCAACGTCTTAGGGGCTTTCTTGGGCGCCAAGCATGCCGCGAGGGTCATGGTGAAGGCACAGAGGGGAGGCGTTATCCTCTTCACGACGAGCATTACTTCTGTGATCGGAGGCCAGGCAAAACCGGCTTACAGCGCATCGAAGCACGCCTTGGTGGGGCTGATGAAAGATCTTTGCGTGGAACTTGGGCAGCATGGGATTAGAGCGAATTGCATTGCTCCGGGGGGGATTGCGACGCCAATGCTGAACGGTTGGTTGAAGATGGAGAGGGAGGGGACAGAGGAGATCCTGCAGTCGGTGGGGGTGCTGAAAGGTGGAGTGGTTAAGGAGGAAGACGTGGCAGAGGCGGCGGTTTATTTGAGCAGCGACGAGGGGAGGTTCATAAGTGGAGTTAACCTTGTGGTGGATGGGGGTTATAGCTCAACCAATGGCTCATTCGCTATGATAGCGAACGTTCTCAAAAACATCCAAACCACCAATTGCATTGATGCCTAA 870 0.5241 MAPVAKRLEGKVAIITGGAGAIGATTAKLFLQHGAKVIIADVQDELGISLCKSLITKDGAANNNNNIDYVHCDVTSEQDVKNAVDLAVSKYGHLDIMYNNAGTAGDNIKRPMENSTVEDFKRIFDVNVLGAFLGAKHAARVMVKAQRGGVILFTTSITSVIGGQAKPAYSASKHALVGLMKDLCVELGQHGIRANCIAPGGIATPMLNGWLKMEREGTEEILQSVGVLKGGVVKEEDVAEAAVYLSSDEGRFISGVNLVVDGGYSSTNGSFAMIANVLKNIQTTNCIDA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02352 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Arst6g02352 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Arst6g02352 289 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 IPR002347 -
Arst6g02352 289 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Arst6g02352 289 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Arst6g02352 289 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Arst6g02352 289 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Arst6g02352 289 PRINTS Glucose/ribitol dehydrogenase family signature 92 103 IPR002347 -
Arst6g02352 289 PRINTS Glucose/ribitol dehydrogenase family signature 228 248 IPR002347 -
Arst6g02352 289 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Arst6g02352 289 Pfam Enoyl-(Acyl carrier protein) reductase 19 265 - -
Arst6g02352 289 FunFam Short-chain dehydrogenase reductase 1 272 - -
Arst6g02352 289 Gene3D - 3 285 - -
Arst6g02352 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 265 IPR036291 -
Arst6g02352 289 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 5 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02352 Arst-Chr6 72608305 72609814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02352 8 263 Acyl Lipid Metabolism Gene Families AT1G63380 28.571 9.64e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02352 - - aprc:113863381 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02352 6 72608305 72609814 Arst6g02352 6 72608305 72609814 ECH