Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02224 ATGGTTTACACCGTCTCGGGGATTCAGTTCCCCTCGGTTCCTTCGTTGCAGAAATCGTCGCAGCTGAGCTTCTACGATCGAAGGAGCGCTTCGTTCTCATTTCTCCTGAACAGGAACTCCTTCTCTCGGAAAAGTCTCGCTGTAAAATGTTCCCATGATTCTGACTTGTCATCTTCCTCGGTTGCTGAATCTGATAAAGTACTTATTCCTCAAGGTCATGATAACTCTTCAACCACGACTGATGAAGTTGAAGCTCCTGATATAACTTCAGAGGATCCGCAGAAAATACAAGAGTTTACCATGAAAGGTGAGAAAATTGATTATGAAGCAGTTAGCACTGACAAAGATGACAAGGATGGGCAAGGTCATGTTTTGTCATCACATGTGGATGTTGACACCAATACTCAAGCTGAGAATACATCAGTATCTATAAACAAGAAAGTGAAGGTCGAAAGTGAGGAAGCTAGACCAAAGATCATTGCCCCACCTGGCACTGGTCATAAAATATATGAGATTGATCCATCTTTGCAAGCTCACCGTGCTCATCTTGACTTCCGTTATGGACAATATAAGAGATTGCTTGAAGAAATTAACAAGAATGAAGGTGGTCTGGATGCATTTTCTCGTGGTTATGAAAAATTTGGCTTCACCCGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCAACGTCAGCAGCATTAATTGGAGATTTCAACAACTGGAATCCAAACGCAGATGTAATGACTCGGATCCGCATGGAAACTCCGTCTGGAATCAAAGATTCAATCCCTGCTTGGATAAAGTTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGTATATACTATGATCCACCAGAAGAGGAAAAATATGTCTTCAAATATCCACAGCCAAAGAGACCAAAATCACTTAGAATATATGAATCACATGTTGGAATGAGTAGTCCGGAACCAAAAATCAATACGTATGTCAACTTTAGAGATGAAGTGCTACCTCGCATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATTCAAGAGCATTCTTATTATGCTAGCTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGGTTTGGAACTCCGGATGATCTCAAGTCTCTCATAGACAAAGCCCATGAATTAGGCCTGCTTGTTCTGATGGATATTGTACATAGTCATGCATCAAATAATACACTGGATGGGCTGAACATGTTTGATGGAACTGATACTCATTACTTCCATGGTGGGTCACGAGGTTATCATTGGATGTGGGATTCTCGTCTTTTTAACTATGGAAGCTGGGAGGTTCTAAGGTATCTGCTTTCAAATGCAAGATGGTGGCTGGAAGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTATACTCATCATGGATTGGGGGTTGGTTTTACTGGAAATTACAATGAGTACTTCGGTTTTGCAACTGATGTTGATGCTGTGGTTTACCTGATGCTGGTTAATGATGTCATTCATGGGCTCTTTCCTGAGGCTGTTACTATTGGTGAAGATGTCAGTGGAATGCCAACATTTTGCCTTCCTACACAAGATGGTGGGGTTGGCTTTGACTACCGCCTGCACATGGCCATTGCAGACAAGTGGATTGAGATTCTCAAGAAGAAAGATGAAGACTGGGAAATGGGTGATATAGTTCACACTCTCACAAACAGAAGGTGGCTAGAAAAATGTGTAGCATATGCTGAAAGTCATGACCAAGCTTTGGTTGGGGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCCTTAGATAGACCATCTACTCCTCTCATAGATCGTGGTATAGCACTACACAAGATGATTAGGCTTATCACAATGGGTCTTGGTGGGGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTACTGGTGCAGTAATTCCCGGGAATAATTACAGTTATGATAAATGTAGGCGTAGATTTGACTTGGGGGATGCAGACTATCTTAGATATAGGGGGATGCAAGAATTTGATCAGGCTATGCAGCATCTGGAAGAAAGGTTTGGTTTCATGACTTCTGAACACCAATATATTTCTCGGAAACATGAGGGTGACAAAGTTATAGTGTTTGAAAGGGGCAAACTTGTATTTGTCTTCAATTTTCATTGGTACAACAGCTATTCAGATTACAGAGTTGGATGTTTAAACCCAGGGAAATACAAGATTGTCTTGGATTCAGATGATCCCTTGTTTGGTGGCTTCAACAGACTCAATCCCACAGCCGAGTACTTCACCTCTGATGGCTGGTATGACGGCCGACCCCGATCTTTTCTCGTGTATGCACCTTCTAGAACAGCTGTGGTGTATGCCCTCGCAGATGAAGCTGAGCCAGAGCCAACGCTAAAACCAGTTGAAGTCCTAAAACCAGTTGAAGTGCTAGTGATGGAACCAGAGCTAGAGCCAGAGCCAAAGCAAGTGCTAGAGTCAGAGTCAAAGCCAGAGCCAGTTGAAGCAGAAGTTGAACCCTGA 2610 0.4257 MVYTVSGIQFPSVPSLQKSSQLSFYDRRSASFSFLLNRNSFSRKSLAVKCSHDSDLSSSSVAESDKVLIPQGHDNSSTTTDEVEAPDITSEDPQKIQEFTMKGEKIDYEAVSTDKDDKDGQGHVLSSHVDVDTNTQAENTSVSINKKVKVESEEARPKIIAPPGTGHKIYEIDPSLQAHRAHLDFRYGQYKRLLEEINKNEGGLDAFSRGYEKFGFTRSATGITYREWAPGATSAALIGDFNNWNPNADVMTRIRMETPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKYPQPKRPKSLRIYESHVGMSSPEPKINTYVNFRDEVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDTHYFHGGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLGVGFTGNYNEYFGFATDVDAVVYLMLVNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEILKKKDEDWEMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPTGAVIPGNNYSYDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEERFGFMTSEHQYISRKHEGDKVIVFERGKLVFVFNFHWYNSYSDYRVGCLNPGKYKIVLDSDDPLFGGFNRLNPTAEYFTSDGWYDGRPRSFLVYAPSRTAVVYALADEAEPEPTLKPVEVLKPVEVLVMEPELEPEPKQVLESESKPEPVEAEVEP 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02224 869 Pfam Alpha amylase, catalytic domain 335 407 IPR006047 GO:0005975
Arst6g02224 869 SMART aamy 325 685 IPR006047 GO:0005975
Arst6g02224 869 MobiDBLite consensus disorder prediction 55 90 - -
Arst6g02224 869 FunFam 1,4-alpha-glucan branching enzyme 289 715 - -
Arst6g02224 869 Gene3D Glycosidases 295 715 - -
Arst6g02224 869 Gene3D Immunoglobulins 252 294 IPR013783 -
Arst6g02224 869 MobiDBLite consensus disorder prediction 55 84 - -
Arst6g02224 869 SUPERFAMILY Glycosyl hydrolase domain 720 819 - -
Arst6g02224 869 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 147 253 - -
Arst6g02224 869 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 147 253 - -
Arst6g02224 869 Gene3D - 720 826 IPR013780 -
Arst6g02224 869 MobiDBLite consensus disorder prediction 846 869 - -
Arst6g02224 869 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 213 253 IPR004193 GO:0004553|GO:0005975
Arst6g02224 869 CDD AmyAc_bac_euk_BE 291 706 - -
Arst6g02224 869 Pfam Alpha amylase, C-terminal all-beta domain 724 817 IPR006048 GO:0003824|GO:0005975|GO:0043169
Arst6g02224 869 SUPERFAMILY E set domains 207 254 IPR014756 -
Arst6g02224 869 SUPERFAMILY (Trans)glycosidases 299 713 IPR017853 -
Arst6g02224 869 FunFam 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 720 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02224 Arst-Chr6 62368673 62384390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02224 29 820 Glycoside Hydrolase AT5G03650 72.960 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02224 K00700 - gmx:100785968 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02224 6 62368673 62384390 Arst6g02224 6 62368673 62384390 ECH