Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02172 ATGCAGCAGCATCAAAAAGTTATGCTGGAAAATTGCAGCTTGCCCTTGAACAACTTATTAGTTGTTGGCAGTGAAGAGACATGGAAAAATGTGCATAGTGCAGACGAATTAACAGAGCAATTTAGGCACCTAAACATCAATAGAGAAAGTAGAGAACTTCTATTACATGGGCAGAATGCACTTGTCCCGTATAACCAGCAACATCAAAAGCACAAAGGCCCTGCCAATGGATATGGCACCATCATTCCCTACGAGGGCTCATTTGATCTCATTAAAAAACAACGCCCACGACCTAAAGTTGACCTTGATGAGGAGACTAATAGAGTGTGGAAGCTTCTTCTATTAGATATAAACAGTCCTGGAATTGATGGAATGGATGAAGACAAGGCTAAATGGTGGGAAGAAGAACGAAAAGTGTTCCGTGGAAGGGCCGACTCATTTATTGCTCGGATGCATCTTGTACAAGGAGACAGACGATTTTCAAAATGGAAAGGATCAGTTGTGGACTCAGTGGTGGGAGTTTTCCTCACACAAAATGTCTCGGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTCCCCCTGAAGTCAAGCAACAAGTATCAAACATACAGTGAGGGAAGCACAAGCTTGTTAGTCAACAGACCACAACCAGAAGTGTACATTGTGGAACCAGAGGAGAGTTCACAGAAAGTATTGAATCCATGTGCTTATGACTTGAGTTCTATGACAATTGAGAGCACTGAACATTCTGAAGGAAAAGAAGTTGTTGACAGCAACGATTTCTGCAGAACAAATGGGAGCTTAACTAGCTCAACAGATGAATCAAACTTCAAACTGTCAGAATCAACTCAGAAACATATGAGGGACAACCATTGTCCATTGGAAAGTGGACCAGTTGGTGCCACCATAGGGGAAGCACAAGAAATTTTGTGTATTGGGAGTGTTAGCAAAGAGTTAAGTGACATGGTGTCATCCCAATGCTCTGTCATTACCTCTCAAATATGTGCAGAGTGTTCAGTTGAGCAAAGTCCAGAGAAGATAGGATCATGCTCAGAGAGCAACTCAGAAGTAGAAGAACTATCAAATGCAGCCAAGTACAACATCTTTCATGATAGAACTTCTTTCAGTAAGCTTTTAGAAATGGCAAGTTTGACAACATTACATGAAGTAAACAGTCAAACAAGCAAATCAACTGAGAACTCAAGAGATGCATCTGGTCAATCTATAGGCATAAAGCATGGCAACCAAACAGAAAAGTTGAATGTTACCCAAGATTTCCCAGAAGCCTCCATCATCACATGTAATGAATATTCTTTGAAAATGACCCCTAAAGGAGGAGTACTTGAAGCTGGCCCTTTCGAAATAGAAGACTTGTCAACTGATTTCAGAAAGAATAAAGAAGAAAATGACATGAAGGGGCCTGGTGTTCAAGCATCAGAGTCTGAAACCCAAGCTGCAATTGCCCATTCTCAATGTATGCTATCTCAGTTTCACAGTCAACAACAAAGTAATCACAAAGAGAAAAATGCTTTGCATGTTTTAGAAGAAACTCAAGATCCTATACAGAAACCAAGGGAATTAGATTGTGGTCACAAGAGCAATACCGTCAAAGAACACACTAAAATTGCCTCCACAAAATCAACAAAGAGTAGGGTGCACCTAAAGGATAAAAAAGATAATTTTGATTGGGATAGTTTAAGAAGACAAGCACAAGATAAGGCCGGGAAGAGGGAAAAGACAGAAAACACCATGGACTCTTTGGACTGGGATGCTGTTAGACGTGCAGACGTCAGAGAGATTGCTGATGCAATCAAGGAAAGGGGCATGAACAACATGCTTGCTGAACGTATTAAGAACTTCTTAAATCTCTTGGTTGATAAACATGGGGCCATTGACCTTGAGTGGCTAAGAGATGTTCCACCAGATCAAGCAAAAGAATACTTGCTCAACATAAGGGGATTAGGATTGAAGAGCGTGGAGTGTGTGCGACTTTTAACATTGCATAATCTTGCTCTCCAGCCACTACCTGAGTCACTACAATTGCATCTTCTAGAATTGTACCCTGTGCTGGAATCCATACAAAAATATCTTTGGCCCCGACTGTGCAAGCTAGACCAAAGAACACTGTATGAGCTGCACTATCAGCTGATTACATTTGGAAAGGTCTTCTGTACAAAATATAAACCAAACTGCAATGCATGCCCAATGAGAGGGGAATGTAGACACTTTGCAAGTGCTTTTGCAAGTGCAAGACTTGCCCTACCAGGACCGGAGCAAAAAAATATAGTAATCAAAAATGGAAATAACGCAACATATCAGAACCTGTCGGTAACCATCAATCAATTGCCCTTGCCTCTCCCTACAAACACAAGCCAAGCAGAAGAACTTCAAGAAATACAAGCAAGCAAACAACTTGAAGCAAGATCCGAAATCAATATTTGCCAACCAATTATTGAAGAGCCATCAACTCCAGAACCAGAATGCACCCAAGTGTTAGGAAATGATATAGAGGATGCCTTTTGTGAGGAAACATGTGAAATTCCAGCCATCAATGTAGACATGGAAGAACTCACTTTGAATGTACAAAATTATATGGAGGAAAACATGGATCTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTCGCCCTTACTCCAGAAGCTGCCTGCATTCCAACGCCCAAGCTAAAGAATGTGAATCGATTGCGCACAGAGCATTGGGTTTATGAACTCCCAGATTCACATCGTCTATTAGAAGGGTGGGAGAAGCGAGAGCCTGATGATCCAGGAAAATACCTTCTAGCTATATGGACTCCAGGTGAGACAGCAAATTCTACACAGCCACCAGAAAAAAAATGCAGCTTTCAGGACTGTGGCCAGCTCTGTAATGAGAAAGAGTGCTTTCAATGCAACAGTTTCCGCGAAGCAAATTCACAGATAGTCCGAGGGACAATCCTGATACCATGTCGAACAGCTATGAGAGGGAGTTTTCCGTTAAATGGCACCTATTTCCAAGTCAACGAGGTATTTGCTGATGATGAATCAAGTCTTAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTCAGGAGGCGAACAGTATATTTCGGAACCTCCATCCCAACCATTTTTAGAGGTTTAACAACACAAGAAATTCAACGATGCTTTTGGAGAGGATATGTTTGCGTGCGGGGATTCGACAGGGAGAAAAGAGCGCCGCGCCCTCTGAAGGCCAGGCTTCACTTCCCAGCTAGCAAGTTGGAGAAGAAAAAGCCATCAGCTCCAGCAAACACACCAGAAGAGCTTAATCTTAATCTGGAACCAAACCCGGAACAGCCAGAGCTGCTTGCCAACACTCCCAACCATTAA 3381 0.423 MQQHQKVMLENCSLPLNNLLVVGSEETWKNVHSADELTEQFRHLNINRESRELLLHGQNALVPYNQQHQKHKGPANGYGTIIPYEGSFDLIKKQRPRPKVDLDEETNRVWKLLLLDINSPGIDGMDEDKAKWWEEERKVFRGRADSFIARMHLVQGDRRFSKWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPLKSSNKYQTYSEGSTSLLVNRPQPEVYIVEPEESSQKVLNPCAYDLSSMTIESTEHSEGKEVVDSNDFCRTNGSLTSSTDESNFKLSESTQKHMRDNHCPLESGPVGATIGEAQEILCIGSVSKELSDMVSSQCSVITSQICAECSVEQSPEKIGSCSESNSEVEELSNAAKYNIFHDRTSFSKLLEMASLTTLHEVNSQTSKSTENSRDASGQSIGIKHGNQTEKLNVTQDFPEASIITCNEYSLKMTPKGGVLEAGPFEIEDLSTDFRKNKEENDMKGPGVQASESETQAAIAHSQCMLSQFHSQQQSNHKEKNALHVLEETQDPIQKPRELDCGHKSNTVKEHTKIASTKSTKSRVHLKDKKDNFDWDSLRRQAQDKAGKREKTENTMDSLDWDAVRRADVREIADAIKERGMNNMLAERIKNFLNLLVDKHGAIDLEWLRDVPPDQAKEYLLNIRGLGLKSVECVRLLTLHNLAXLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKYKPNCNACPMRGECRHFASAFASARLALPGPEQKNIVIKNGNNATYQNLSVTINQLPLPLPTNTSQAEELQEIQASKQLEARSEINICQPIIEEPSTPEPECTQVLGNDIEDAFCEETCEIPAINVDMEELTLNVQNYMEENMDLQEGEMSKALVALTPEAACIPTPKLKNVNRLRTEHWVYELPDSHRLLEGWEKREPDDPGKYLLAIWTPGETANSTQPPEKKCSFQDCGQLCNEKECFQCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADDESSLNPISVPRSWIWNLRRRTVYFGTSIPTIFRGLTTQEIQRCFWRGYVCVRGFDREKRAPRPLKARLHFPASKLEKKKPSAPANTPEELNLNLEPNPEQPELLANTPNH 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02172 1127 SUPERFAMILY DNA-glycosylase 142 750 IPR011257 GO:0003824|GO:0006281
Arst6g02172 1127 Coils Coil 859 879 - -
Arst6g02172 1127 Gene3D Hypothetical protein; domain 2 492 672 - -
Arst6g02172 1127 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 23 1097 IPR044811 GO:0019104|GO:0035514|GO:0080111
Arst6g02172 1127 SMART ccc3 728 748 IPR003651 GO:0051539
Arst6g02172 1127 Pfam RRM in Demeter 987 1087 IPR028925 -
Arst6g02172 1127 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 23 1097 IPR044811 GO:0019104|GO:0035514|GO:0080111
Arst6g02172 1127 MobiDBLite consensus disorder prediction 394 420 - -
Arst6g02172 1127 MobiDBLite consensus disorder prediction 528 555 - -
Arst6g02172 1127 Gene3D - 683 757 IPR023170 -
Arst6g02172 1127 Pfam Permuted single zf-CXXC unit 953 984 IPR028924 -
Arst6g02172 1127 MobiDBLite consensus disorder prediction 1087 1127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02172 Arst-Chr6 54850268 54857090 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02172 - - adu:107493869 2226.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02172 6 54850268 54857090 Arst6g02172 6 54850268 54857090 ECH
Arst6g02171 6 54847108 54850269 Arst6g02172 6 54850268 54857090 PCT