Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02086 ATGGTGAAGGCCTACCTCCGTTACGAGCCGGCGGCATCGTTCGGCGTCATCGCCTCCGTCGAGTCCAACATAGCCTATGACAGCTCCGGCAAGCACCTCCTCTCTCCGGCGCTCGAGAAGGTCGGCGTCTGGCACGTCCGTCCAGGCATCTGCACCAAAACCCTAACCCCTTCCCCTGCCTCTCGAGTTTCCTCCCTCGCCGTCACCTCCATCGCCCCTGCCCCTTCTTCCTCCCAGGTAGCGGTTGGTTATGCTGATGGTAGCATAAGGATTTGGGACTCTGATGCGGGAACTTGTGAGACCACGCTGAGTGGGCACAAGGGAGCCGTCACTGCTCTTCTTTACAACAAGGCTGCTTCGGTGCTTGCTTCCGGGAGCAAGGACAATGATATCATTTTGTGGGATGTTGTTGGTGAGACCGGCATGTTTCGCCTCCGCGGGCATCGTGACCAGGTGACTGATGTAGTATTTGTGGGGTCTGGGAAAAAGCTAGTTAGTTCCTCGAAAGACAAGTTCTTGAGAGTGTGGGATCTAGATAGCGAGTATTGTATACAAATTGTTGGTGGTCATCATGGTGAAATTTGGTCTATAGATGTTGATCCTGAGGAAAGGTATCTGGTCACTGGTTCTGCAGACAAGGTGCTCCGGTTTTATTCAATCAAGCATGAGTCTGTGGATGGACAATCTGTAAATGCGGACAGTGCAGTGGTTGGTGATGGAGGCTCTTCTGTTCAAAACAAATGGGAAGTTTTGAGGCAGTTTGGCGAGATTCAGCGGCAAAGCAAGGAGAGAGTGGCAACTGTGCAGTTCAGTAAGGCAGGGAAACTGCTAGCTTGTCAGGTTGCAGGAAAGACAGTTGAGATATACCGTGTTCTGGATGAGGCTGAGGCGAAGAAGAAGGCAAGACGTCGGGTTCACCGCAGGAAAGAGAAGAAACATGCCAAAGAGGCTTTGGGGGGAACTGAAAATGGAGAAGTGAATAAAGGGGTTAAAGGAGATATAACTTCCGAGACTCAAGGGCTCATAGAAACAAGTAACCCTGCAGTTACTGTGCCTGATGTTTTTAAGCTACTCCATACCCTTAGAGCTAGCAAAAAGATATGCTCCATATCTTTTTGTCCAGTCACTCCTAAGAATTCACTGGCTAGTTTAGCATTGTCCTTGAACAATAATCTACTTGAGTTTTACTCCATTGAAAGCAGTGAAGCAACAAAAACACTTGCTATTGAGCTACAAGGACACCGTTCTGATGTTAGAAGTGTCACACTTAGTTCGGACAACAGTCTTTTGATGTCAACTAGTCACAATGCAGTTAAGATTTGGAACCCTAGCACTGGGTCATGCCTAAGGACAATCGATTCTGGGTATGGACTGTGCAGTTTAATTCTGCCCTCTAACAAGTATGGGCTTGTTGGAACTAAAGATGGAACCATAGAAATTATTGACATTGGAAGTGGCACTCGTTTAGAAGCAGTGGAAGCTCATGGTGCTTCTGTCCGTTCAATTGCTCTCCTGCCAGATAAAAATGGTTTTGTCACAGGAAGTGCTGATCATGACGTTAAGTTTTGGGAGTACCAGTTGAAGCAAAGCCCCGGTCAAGCTACTAAGCAACTTAGTGTGTCAAACGTCAGTACAATGAAGATGAATGATGATGTTCTTGTGGTTGCAATAAGTCCCGATTCTAAATATATTGCTGTGGCGCTGTTAGATAGTACTGTGAAGGTTCACTTTGCAGACACGTTCAAATTCTTCCTTTCATTATATGGCCATAAGCTGCCTGTTCTTTGTATGGATATCTCATCAGATGGAGATTTAATTGTGACTGGATCAGCAGACAAAAATTTGAAGATTTGGGGTCTGGATTTTGGTGATTGTCATAAATCTATTTTTGCGCATGCTGACAGTGTTATGGCAGTGCAATTTGTTCCCAAGACACACTATGTGTTTAGTGTTGGGAAAGATCGGCTGATAAAATATTGGGATGCTGATAAATTTGAATTGCTGTTGACTCTCGAAGGACATCATGCAGATGTCTGGTGTCTTGCAATAAGTAATCGTGGTGATTTCGTGGTCACTGGATCTCATGACCGATCAATCCGCCGATGGGATCGTACAGAAGAGCAGTTTTTCATTGAGGAAGAAAAGGAGAAAAGGTTGGAGGAAATGTTTGAGGCTGATCTTGACAATGGTTTTGAAAACAAGTATGCACCAAAGGAAGAAGTACCGGAGGAGGGTGCTGTGGCTTTAGCTGGGAAAAAAACCCAGGAGACCCTTACTGCCAGTGACTTGATTATCGAGAGATTAGACATAGCAGAAGCTGAGAAAAAGCGTATTGCAGAACATGAGGAGGAGAAAAATAATAAAAATGCTGCTGCATTCCAAGCAAATCCGCTTATGAATGGGCTTTCCCCTTCTGATTATGTTCTTAGTGCATTCTCAGATATTCACTCCAATGATCTTGAGCAAACATTATTGGCTTTACCCTTTTCTGATGCTTTGAAACTTCTGTCATACTTGAAGGATTGGACTTCATATTCAGATAAGGTCGAGCTTATTTGCCGGATAGGAACACTACTGTTGCAGACACATTATAATCAGCTGCTTACTACACCGGCTGCTAGACCTATTTTGACTGCTTTCAGCGACATTTTTTATGAACATGTCAAGGGATGGAAAGATATCTTTGGTTTTAACCTTGCAGCGATGGATCATATCCAGCAAATTCTGGCTACGAGATCAGATGCTATTTTCCGTGATGCAAGATCTAAACTACTAGAGATACATGCTAAACAATCGAAACATGTAGCAGAAAGTTACGACACTGGAGAAGGGAAGAGGAGGAAGAAGTAG 2850 0.4484 MVKAYLRYEPAASFGVIASVESNIAYDSSGKHLLSPALEKVGVWHVRPGICTKTLTPSPASRVSSLAVTSIAPAPSSSQVAVGYADGSIRIWDSDAGTCETTLSGHKGAVTALLYNKAASVLASGSKDNDIILWDVVGETGMFRLRGHRDQVTDVVFVGSGKKLVSSSKDKFLRVWDLDSEYCIQIVGGHHGEIWSIDVDPEERYLVTGSADKVLRFYSIKHESVDGQSVNADSAVVGDGGSSVQNKWEVLRQFGEIQRQSKERVATVQFSKAGKLLACQVAGKTVEIYRVLDEAEAKKKARRRVHRRKEKKHAKEALGGTENGEVNKGVKGDITSETQGLIETSNPAVTVPDVFKLLHTLRASKKICSISFCPVTPKNSLASLALSLNNNLLEFYSIESSEATKTLAIELQGHRSDVRSVTLSSDNSLLMSTSHNAVKIWNPSTGSCLRTIDSGYGLCSLILPSNKYGLVGTKDGTIEIIDIGSGTRLEAVEAHGASVRSIALLPDKNGFVTGSADHDVKFWEYQLKQSPGQATKQLSVSNVSTMKMNDDVLVVAISPDSKYIAVALLDSTVKVHFADTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSIFAHADSVMAVQFVPKTHYVFSVGKDRLIKYWDADKFELLLTLEGHHADVWCLAISNRGDFVVTGSHDRSIRRWDRTEEQFFIEEEKEKRLEEMFEADLDNGFENKYAPKEEVPEEGAVALAGKKTQETLTASDLIIERLDIAEAEKKRIAEHEEEKNNKNAAAFQANPLMNGLSPSDYVLSAFSDIHSNDLEQTLLALPFSDALKLLSYLKDWTSYSDKVELICRIGTLLLQTHYNQLLTTPAARPILTAFSDIFYEHVKGWKDIFGFNLAAMDHIQQILATRSDAIFRDARSKLLEIHAKQSKHVAESYDTGEGKRRKK 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 492 524 IPR001680 GO:0005515
Arst6g02086 949 FunFam WD repeat domain 3 456 648 - -
Arst6g02086 949 CDD WD40 99 524 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 103 136 IPR001680 GO:0005515
Arst6g02086 949 Gene3D - 579 771 IPR015943 GO:0005515
Arst6g02086 949 FunFam WD repeat-containing protein 3 isoform A 657 715 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 145 180 - -
Arst6g02086 949 Gene3D - 349 578 IPR015943 GO:0005515
Arst6g02086 949 FunFam Transducin family protein / WD-40 repeat family protein 60 327 - -
Arst6g02086 949 MobiDBLite consensus disorder prediction 302 331 - -
Arst6g02086 949 Pfam WD domain, G-beta repeat 666 703 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 183 218 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 410 442 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 97 135 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 493 523 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 144 177 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 585 618 IPR001680 GO:0005515
Arst6g02086 949 Pfam WD domain, G-beta repeat 61 93 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 445 482 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 580 619 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 48 93 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 539 577 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 138 177 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 622 661 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 404 442 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 485 524 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 664 703 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 247 290 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 96 135 IPR001680 GO:0005515
Arst6g02086 949 SMART WD40_4 180 219 IPR001680 GO:0005515
Arst6g02086 949 PRINTS G protein beta WD-40 repeat signature 606 620 IPR020472 -
Arst6g02086 949 PRINTS G protein beta WD-40 repeat signature 122 136 IPR020472 -
Arst6g02086 949 PRINTS G protein beta WD-40 repeat signature 164 178 IPR020472 -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 411 451 IPR001680 GO:0005515
Arst6g02086 949 CDD WD40 407 703 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 103 136 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 671 703 IPR001680 GO:0005515
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 671 703 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 587 621 - -
Arst6g02086 949 Gene3D - 61 314 IPR015943 GO:0005515
Arst6g02086 949 FunFam Transducin family protein / WD-40 repeat family protein 342 455 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 186 IPR001680 GO:0005515
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 102 IPR001680 GO:0005515
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 221 IPR001680 GO:0005515
Arst6g02086 949 SUPERFAMILY WD40 repeat-like 264 708 IPR036322 GO:0005515
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 629 670 IPR001680 GO:0005515
Arst6g02086 949 SUPERFAMILY WD40 repeat-like 26 402 IPR036322 GO:0005515
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 492 524 - -
Arst6g02086 949 Coils Coil 292 312 - -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 629 661 - -
Arst6g02086 949 ProSitePatterns Trp-Asp (WD) repeats signature. 164 178 IPR019775 -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 187 221 - -
Arst6g02086 949 Coils Coil 768 791 - -
Arst6g02086 949 Pfam Dip2/Utp12 Family 806 906 IPR007148 -
Arst6g02086 949 PANTHER WD REPEAT CONTAINING PROTEIN 3 WDR3 4 942 - -
Arst6g02086 949 PANTHER WD REPEAT CONTAINING PROTEIN 3 WDR3 4 942 - -
Arst6g02086 949 ProSitePatterns Trp-Asp (WD) repeats signature. 122 136 IPR019775 -
Arst6g02086 949 ProSiteProfiles Trp-Asp (WD) repeats profile. 587 628 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02086 584 712 Miscellaneous Gene Families AT5G08390 27.132 1.06e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02086 K14556 - gmx:100775810 1573.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02086 6 44923166 44930563 Arst6g02086 6 44923166 44930563 ECH