Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02005 ATGCCTGCAACTCCATTTTCGTGCTCGTACCTCATCCTTCAGCCACGCTTCAACTCCTACTTCAACCCTCTCTTCCGTTCCTTCACCTACCAGCTCTCTACTTCACCGCTCTCCTTCAATGGAATCAAGTTCACCGCCGCCAGAGTCCACTCTTCACTCTCGCCGGCGGCGGAGACCGACTCTCAGAGCGGCGGTGGCGGAAGATCTGGAGCTTTATCTCCCGGTCCTATAGTCGCTGGAGAGGTGCAGAGGATCGACGTGAACCCTCCCAAGGGGACGCGTGATTTCCCGCCTGAGGAAATGCGCTTGCGCAACTGGCTCTTCAACAATTTCAAAGAGGTTTCGCGTTTATATGGATTTGAGGAGGTTGATTTTCCTGTGCTTGAGAATGAGGCATTGTTCACTAGGAAAGCAGGGGAGGAGATTAAGGACCAGCTTTATTGTTTCGAAGACCGGGGTAATCGTCGTGTTGCACTGAGGCCAGAACTTACTCCTTCTTTGGCAAGGCTGGTGATACAGAAAGGCAAGTCTGTACCACTGCCATTGAAGTGGTTCACTGTTGGACAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGCCGTCGTGAGCAATAATGAAACTGTCTGAATGTTCCTTGTAATAAAGCTGAAGCAGAGCTTATATCGTCTATCGTCACTTTATTCAAGCGAATAGGAATTAAAGAATCCGATGTTGGGTTTAAAGTTTCCAGCCGAAAGGTTCTACAGGAAGTATTGAAGTGTTATTCCATACCTGAAAGTTTATTTGGCAAGGTCTGCGTCATTATTGACAAAATCGAGAAAATTCCAGTTGATGAGGTAAAGAAAGAGTTGATGGCTGCTGGTGTATCACAAGAGGCTGTCGAGGAGCTTTTGCAAGTCCTTTCTGTAAAGTCATTGACAGGGTTAGAAGAGAAGCTTGGAAGCAGTGGGAAAGCAATTGCTGACCTGAAACAGTTGTTTTCACTTGCTGAAAAATTTGGTTACTCTGAATGGATTCAATTTGATGCATCAGTTGTTCGAGGCCTTGCTTACTACACTGGCATTGTATTCGAGGGTTTTGATCGAGAAGGAAAGCTGCGAGCTATTTGCGGTGGTGGTCGTTATGATCATTTGTTCTCAACTTTTGGTGCTGATGACATTCCTGCCTGTGGTTTTGGATTTGGTGATGCAGTTGTAGTGGAATTACTTAGAGAAAAGGGTCTGCTACCAGATCTCAGCTTACAAATGGATTACATTGTATGTGCCTTGGATGAAGATCTTCAAGGTGCTGCTGCTATGGTTGCTCATGTTCTCAGAAAAAAGGGACAGAGTGTTGACTTAGTTTTGGAAAGCAAACCTCTTAAGTGGGTTTTTAAGCGAGCTGCCCGAAATAATGCTCAGCGGCTTGTATTAGTGGGGAGCTCTGAGTGGCAAAGGGGTGTGGTTGGTGTCAAAATTCTTGCTACTGGTGAACAGTACGAGGTTAAGCTGGATGAACTGATATAA 1506 0.4615 MPATPFSCSYLILQPRFNSYFNPLFRSFTYQLSTSPLSFNGIKFTAARVHSSLSPAAETDSQSGGGGRSGALSPGPIVAGEVQRIDVNPPKGTRDFPPEEMRLRNWLFNNFKEVSRLYGFEEVDFPVLENEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVPLPLKWFTVGQCWRYERMTRGRRREQXXNCLNVPCNKAEAELISSIVTLFKRIGIKESDVGFKVSSRKVLQEVLKCYSIPESLFGKVCVIIDKIEKIPVDEVKKELMAAGVSQEAVEELLQVLSVKSLTGLEEKLGSSGKAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIPACGFGFGDAVVVELLREKGLLPDLSLQMDYIVCALDEDLQGAAAMVAHVLRKKGQSVDLVLESKPLKWVFKRAARNNAQRLVLVGSSEWQRGVVGVKILATGEQYEVKLDELI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02005 501 Pfam Histidyl-tRNA synthetase 92 393 IPR041715 -
Arst6g02005 501 SUPERFAMILY Class II aaRS ABD-related 416 501 - -
Arst6g02005 501 CDD HisRS-like_core 100 403 IPR041715 -
Arst6g02005 501 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 92 410 IPR006195 -
Arst6g02005 501 FunFam Histidine--tRNA ligase chloroplastic/mitochondrial 83 407 - -
Arst6g02005 501 MobiDBLite consensus disorder prediction 55 76 - -
Arst6g02005 501 FunFam Histidine--tRNA ligase chloroplastic/mitochondrial 409 501 - -
Arst6g02005 501 Gene3D - 409 501 IPR036621 -
Arst6g02005 501 SUPERFAMILY Class II aaRS and biotin synthetases 89 407 IPR045864 -
Arst6g02005 501 PIRSF His-tRNA_synth 83 501 IPR004516 GO:0005737
Arst6g02005 501 Coils Coil 490 501 - -
Arst6g02005 501 Pfam Anticodon binding domain 420 501 IPR004154 -
Arst6g02005 501 PANTHER HISTIDYL-TRNA SYNTHETASE 85 500 IPR004516 GO:0005737
Arst6g02005 501 Gene3D Bira Bifunctional Protein; Domain 2 83 407 IPR045864 -
Arst6g02005 501 NCBIfam histidine--tRNA ligase 89 496 IPR015807 GO:0004821|GO:0005524|GO:0006427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02005 K01892 - gmx:100793186 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02005 6 35644515 35651074 Arst6g02005 6 35644515 35651074 ECH