Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01814 ATGCCTCGCTATGAAGATAAATACGGCAACACACGCCTCTATGTTGGTCGATTGGCTTCAAGGACGCGTTCCCGTGATCTGGAGCGAGTTTTCAGCCGATATGGAAGAGTTCGAGATGTGGATATGAAGCATGATTACGCCTTTGTTGAATTCAGCGATCCTAGAGATGCTGATGATGCAAGATACAACTTGGATGGCCGTGATGTTGATGGAAGTCGTATTATTGTGGAATTTGCGAAAGGGGTTCCTCGTGGTTCCCGTGAATATTTGGGTCGTGGTCCTCCTCCTGGAACTGGGCGTTGCTTTAACTGTGGTATTGATGGCCATTGGGCCCGAGATTGCAAAGCTGGAGACTGGAAGAACAAGTGTTATCGTTGTGGTGAGAGGGGTCATATAGAAAAAAACTGCAAGAACAGTCCCAAAAAGCTGAGTAGACGTGGGCGTAGTTATTCCCGCTCTCCGGTCAGGTCACGTTCCCCAGTCAGGTCACGCTCTCCTCGTCGTGGCAGAAGCAGGGACAGGAGTTACACCCCAGAACGCAGTTACAGTCGATCAAGATCCCCAGTTAGGGGGGATCGAAGCCCAGTTCGTGATAGATCAGAGAGCCCACGCTCTAGAAGCCCTGAACCCAAAGGTAGCCCTCAGCCCTCGAAGGCAAGGAAGCATAGTCCATCACCTGATGAAGGGAGTCCACAGAAGAGAGGTGATGCATCTCCTGGCAATGAGAGGATGGTTACACAGCAAGATGGATCTGATTACAGTGATGGCCCCAGAGGAAAGAGCAGAAGCCCCGCTAGTCCAGCAGGGGATGACAGCCCAAAGGCTAATGGTCGCAGCCGCAGTCCTAGTCCCAGAGATGATGACAGAAGCCCCATTGATGACGAAGAAGACAACCAGCGTAATCTACCAAGAGGCAGTGAGTCCCCTTAA 930 0.514 MPRYEDKYGNTRLYVGRLASRTRSRDLERVFSRYGRVRDVDMKHDYAFVEFSDPRDADDARYNLDGRDVDGSRIIVEFAKGVPRGSREYLGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRRGRSYSRSPVRSRSPVRSRSPRRGRSRDRSYTPERSYSRSRSPVRGDRSPVRDRSESPRSRSPEPKGSPQPSKARKHSPSPDEGSPQKRGDASPGNERMVTQQDGSDYSDGPRGKSRSPASPAGDDSPKANGRSRSPSPRDDDRSPIDDEEDNQRNLPRGSESP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01814 309 MobiDBLite consensus disorder prediction 170 206 - -
Arst6g01814 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 74 IPR000504 GO:0003723
Arst6g01814 309 SUPERFAMILY RNA-binding domain, RBD 7 100 IPR035979 GO:0003676
Arst6g01814 309 Gene3D - 91 119 - -
Arst6g01814 309 Gene3D - 120 171 - -
Arst6g01814 309 SUPERFAMILY Retrovirus zinc finger-like domains 91 139 IPR036875 GO:0003676|GO:0008270
Arst6g01814 309 FunFam serine/arginine-rich splicing factor RS2Z32-like isoform X1 91 119 - -
Arst6g01814 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 81 IPR000504 GO:0003723
Arst6g01814 309 MobiDBLite consensus disorder prediction 134 309 - -
Arst6g01814 309 Pfam Zinc knuckle 100 115 IPR001878 GO:0003676|GO:0008270
Arst6g01814 309 Pfam Zinc knuckle 121 138 IPR001878 GO:0003676|GO:0008270
Arst6g01814 309 SMART c2hcfinal6 100 116 IPR001878 GO:0003676|GO:0008270
Arst6g01814 309 SMART c2hcfinal6 122 138 IPR001878 GO:0003676|GO:0008270
Arst6g01814 309 ProSiteProfiles Zinc finger CCHC-type profile. 100 115 IPR001878 GO:0003676|GO:0008270
Arst6g01814 309 ProSiteProfiles Zinc finger CCHC-type profile. 122 138 IPR001878 GO:0003676|GO:0008270
Arst6g01814 309 SMART rrm1_1 12 77 IPR000504 GO:0003723
Arst6g01814 309 Gene3D - 3 89 IPR012677 -
Arst6g01814 309 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 11 204 - -
Arst6g01814 309 MobiDBLite consensus disorder prediction 280 302 - -
Arst6g01814 309 FunFam Serine/arginine-rich splicing factor RS2Z32 3 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01814 Arst-Chr6 20733390 20736808 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01814 K12896 - gmx:100813237 427.172