Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01788 ATGAAAGGCATTGATATCTTCTGTGCTTCACAATCCTCAACAGCCATATCTCATGCCATGGAACAAGCCTCCTCTTCTTCTTCTTCTTCCAACACCTTCCATCTGGGTGGCAGGGCCCTCGACCGCCACAACCCCATCATCATGGATTCTAGAAGAACACCTTCTAGAGACTTCACTCTCCCACCGACTCCCTCTTCCGTTGACCCCAAACCTGGCCAGCATGATCTCCAAAAGGGTAAGAAAAAATCATCATCATCGTCTTCTCCTCCTTCTTCTTCTTCTTCTTCTAAGAGAAGTTCAAGAAAGGGTCATGATAAGAAAAAGAGTGTGACAGAGAATAAGGTGACTGAACATTTTACCAACAATCACTCTTCAAAGGCCATTGATAGTGTTGTGAGAAGGAGTTGGGTCACTCCTGCTGGTTCATCAAGGTATCTGCTAAGTGACATATCAGATTATGATCCTGTTTTGGCTCTAACTACTTCTAATATTAATGTTGATGATGATAAAAAGAAGGGTCATCAAGTTGTTCATAATCAAGATGAAACAATAAAACATCATCATGCATCTAATTCTAAACCCTCTAGCTCCTCCTCTGCTCCAAAATCTGCTTCGTCAAACCAGGTTGTGGTATTAAGGGTTTCTCTACATTGCAAAGGTTGTGAAGGCAAAGTAAGGAAGCATCTCTCTAGAATGCAAGGAGTTACATCCTTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTAGTTGGGGATGTGACTCCATTGAGTGTATTGGCAAGCATATCAAAGGTTAAGAATGCACAATTTTGGCCACCACCGCCTTCTGGATCCGCTAGTAATCCAGAATCAAGAAAAAGAAACTTGGCCTAA 873 0.4227 MKGIDIFCASQSSTAISHAMEQASSSSSSSNTFHLGGRALDRHNPIIMDSRRTPSRDFTLPPTPSSVDPKPGQHDLQKGKKKSSSSSSPPSSSSSSKRSSRKGHDKKKSVTENKVTEHFTNNHSSKAIDSVVRRSWVTPAGSSRYLLSDISDYDPVLALTTSNINVDDDKKKGHQVVHNQDETIKHHHASNSKPSSSSSAPKSASSNQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPPPPSGSASNPESRKRNLA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01788 290 CDD HMA 211 264 IPR006121 GO:0046872
Arst6g01788 290 MobiDBLite consensus disorder prediction 17 122 - -
Arst6g01788 290 MobiDBLite consensus disorder prediction 190 206 - -
Arst6g01788 290 Pfam Heavy-metal-associated domain 212 264 IPR006121 GO:0046872
Arst6g01788 290 MobiDBLite consensus disorder prediction 181 206 - -
Arst6g01788 290 MobiDBLite consensus disorder prediction 269 290 - -
Arst6g01788 290 SUPERFAMILY HMA, heavy metal-associated domain 208 265 IPR036163 GO:0046872
Arst6g01788 290 ProSiteProfiles Heavy-metal-associated domain profile. 207 273 IPR006121 GO:0046872
Arst6g01788 290 MobiDBLite consensus disorder prediction 82 97 - -
Arst6g01788 290 MobiDBLite consensus disorder prediction 17 35 - -
Arst6g01788 290 Gene3D - 205 269 - -
Arst6g01788 290 PANTHER OS08G0405700 PROTEIN 6 282 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01788 Arst-Chr6 19865780 19867973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01788 - - gmx:100810015 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01788 6 19865780 19867973 Arst6g01788 6 19865780 19867973 ECH
Arst6g01788 6 19865780 19867973 Arst6g01788 6 19865780 19867973 PCT