Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01559 ATGCCACCGCCGCCGACGATGAAGAAGATTCGCCGGTGGCAGAGGACTTTGATCCTCGCTCTTCTCTCCCTCTCCGTTGTCGCTCCTCTAATCTTTGTCTCGCACAGGCTCAATTTTCTTACACCCGATGGAAGAAGAGATTTTCTCGATGATTTGTCAAGCTTCGCATACAAGCCAGATCCTTTGAAGTTGAATGCTATAGAACAGGAAAGTGCTGAAGAGTTAGAAGAACCGAAGCAAGTTGTTTATAAAGAAAATGACTTTGGCGTAGCAATCAGTAACAATTCAGAAAGAACCAATGATTCTGAGGATTCTTTAACTGATGGGAGCAGAAGTAACCTTTTGGAAGTTAATGTTTCAGAAGTAGATCACCATGAAAGACAAGTAGAGGAAGCTCAGCAGAAAGGATTATCCCTCACTGATGGAGATAAGAGGAATTTAAACGAGACAGTTATGCACAATCTGGATATATCCACCAACTCCCAAAGTACAAGAAGTGAGAATATTGAAGTGGGAGATAAGCAATCTGATCGTAAAGCAACTCGCCGCCATCAGAATTCGCGATCTCAATACCGTAAAGTGACAAATCACAAGGTTGAGGAAATAAAGGATCAAATAGTTAGAGCTCGAGCATACTTGAGCTTTGCTCCCCCAGGCAGCAACTCTCACTTGGTCAAGGAGTTGAAACTGCGAATTAAAGATATGGAACGCGTAGCTGGAGAAGCTACCTATGATTCAGATCTGCCAAGGAGTGCTTTGCAGAAAATGAGGCACATGGAGGCTTCACTATCTAAAGCCAACCGAGCTTTCCCAGATTGCTCTTCTATGGCTTCTAAGCTCCGTGCGATGAATCATAATGTTGAAGAGCAACTTCGTTCTCAGCAACGTCAAGCAACATATCTTGTTCATCTTGCTGCAAGGACCACCCCAAAAGGTCTTCACTGTCTTTCTATGCGGCTAACTGCCGACTACTTTGCACTCGGACCCGAGCAGAGGAAGTTCCCAAATGAAAACAAGTTTAATGATCCAAAACTTTATCACTATGCTGTGTTCTCTGACAATGTTTTGGCATCTGCAGTGGTTGTTAACTCTACTGTCTCTGCTGCTAAGGAGGAGGAGAAAATTGTTTTCCATGTAGTGACCAATTCACTCTACTTTCCTGCAATCTCAATGTGGTTCTTGTTAAACCCTCCTGGCAGTGCCACAGTCCACATACAGAACATGGACAACTTTAAATGGTTATCAAAGTACAGCACCTCCAAGAAATATGATTCTAATGATCCAAGATATACTTCTGAATTGAACTACCTACGTTTCTATCTGCCAGAAATTTTCCCTGCTCTACATAAGATTGTGCTTTTTGATCATGATGTGGTGGTGCAACAAGATCTGAGTGGATTATGGAATGCCAATATGGAAGGAAAAGTAATTGGAGCAGTTCAGACTTGTGAGGAAAGCGAATCTTCATTTCGTAGAATGAATATGCTCATAAACTTTTCAGATCCATTCATTGCAAAGAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAATTTGTTTGATTTACAGCAGTGGAGGAGACATAATTTAACTGCTGTCTATCACAAATATCTGCAAATGGGTTCTAAGAGGCCATTGTTTAACACTGGAAGTCTGCCTTTAGGCTGGCTCACCTTCTATAACAAGACAATGGTTTTGGACAGACGGTGGCAAGTTCTTGGCCTTGGTTCTGATTCTGCTGTTGACGGAAATGAGATTGAGCAGTCTGCTGTTATACATTATGATGGAGTTAGAAAGCCATGGCTGGATATTGCGATGAGAAGATACAAGAACTATTGGACCAAATTTGTGAATTTTGACTGCCCTCTTCTGCAAAGATGCAATCTCCAGGCGTAA 1902 0.4222 MPPPPTMKKIRRWQRTLILALLSLSVVAPLIFVSHRLNFLTPDGRRDFLDDLSSFAYKPDPLKLNAIEQESAEELEEPKQVVYKENDFGVAISNNSERTNDSEDSLTDGSRSNLLEVNVSEVDHHERQVEEAQQKGLSLTDGDKRNLNETVMHNLDISTNSQSTRSENIEVGDKQSDRKATRRHQNSRSQYRKVTNHKVEEIKDQIVRARAYLSFAPPGSNSHLVKELKLRIKDMERVAGEATYDSDLPRSALQKMRHMEASLSKANRAFPDCSSMASKLRAMNHNVEEQLRSQQRQATYLVHLAARTTPKGLHCLSMRLTADYFALGPEQRKFPNENKFNDPKLYHYAVFSDNVLASAVVVNSTVSAAKEEEKIVFHVVTNSLYFPAISMWFLLNPPGSATVHIQNMDNFKWLSKYSTSKKYDSNDPRYTSELNYLRFYLPEIFPALHKIVLFDHDVVVQQDLSGLWNANMEGKVIGAVQTCEESESSFRRMNMLINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTAVYHKYLQMGSKRPLFNTGSLPLGWLTFYNKTMVLDRRWQVLGLGSDSAVDGNEIEQSAVIHYDGVRKPWLDIAMRRYKNYWTKFVNFDCPLLQRCNLQA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01559 633 Coils Coil 115 135 - -
Arst6g01559 633 MobiDBLite consensus disorder prediction 160 195 - -
Arst6g01559 633 MobiDBLite consensus disorder prediction 170 184 - -
Arst6g01559 633 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 418 631 IPR029993 GO:0047262
Arst6g01559 633 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 348 622 IPR029044 -
Arst6g01559 633 Coils Coil 277 297 - -
Arst6g01559 633 MobiDBLite consensus disorder prediction 122 144 - -
Arst6g01559 633 SUPERFAMILY Nucleotide-diphospho-sugar transferases 346 630 IPR029044 -
Arst6g01559 633 Pfam Glycosyl transferase family 8 315 607 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01559 Arst-Chr6 15640574 15646657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01559 7 633 Glycosyltransferase AT1G06780 50.779 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01559 K13648 - gmx:100811619 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01559 6 15640574 15646657 Arst6g01559 6 15640574 15646657 ECH
Arst6g01559 6 15640574 15646657 Arst6g01559 6 15640574 15646657 PCT