Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01554 ATGGCCACCACTTCAATCTCAAACATGGTGGTTACCTTGGAAGCCAAGAATCCCCCTAAACTACAAGCAGCACCAGCAGCATCTTCATCATCTCACACCCTGGTCACCACCACAAGAAAACCCAGCATCATGACATGCAAAGCCGCCATAAGCACCCAACTCAAACCAGAGCGACCAATGCCCCCGAAACAAGAACAACTGGACATATCATCCGTATGGCGAAAGCTCCACGGGGAGGACAAGTGGGCCGGGCTTCTTGACCCGTTGGACCCTGGCTTGCGGCTTGAGATAATCCGGTACGGCGAAATGGCACAGGCCACGTATGATTCCTTCGACTACGACCCATACTCCAAGTATTGTGGAAGCTGCAGGTACCCACATGAGAAGCTGTTCCAGTACCTTGACATGACGCACATGGGCTACACCGTTTCACGCTACATCTACGCGACGGCCAACGTCAGCCTGCCCAGCTTCTTCAAGAGGTCCAGGTTCCCTCACAAGATGTGGAGCGACAGGGCCAACTGGGCCGGCTACATCGCCGTTTCCGACGACCAAACCAGCAAGAGCTTGGGGAGGAGGGACATAGCCATTGCGTGGAGGGGGACGGTCACGCACACCGAGTGGCTGGCGGATCTCACGAACTACCTCAGGCCTTTATCTCCGGAGATTCCTTGCGGCGATCAAGGGGTGAAGGTGGAGGCGGGCTTCATGGATCTTTACACTGATAAGTCCCCGCAGTGCCGTTTCTGCAAATACTCTGCCAGACACCAGGTCCTTTCGGAGGTGAGGAAGTTGGTTGAGAAGTACGAAGACGAGGAAGTGTCGATCACCATCACCGGCCACAGCTTGGGCAGCGCGTTGGCCGTACTGAGCGCCTTTGACTTGGCAGAAACTGGCTTAAACGTCAAGAAAGACGGCAGCGGCATCCACATCTCCGTGATCACGTTCGCCGGGCCGAGGGTGGGAAACTGGAGGTTCAAGCAGAGGCTGGAGTTGGATCACGGCGTGAAGGTGCTTCGGGTTGTGAACACTCACGACATTGTTCCGAAGTCGCCGGGATTCATCATCAACGAGAGCTCGCCGGAGTGGGTGTACAGACTGTTCAAGTGGTTGCCTTGGAGCTACGCTCACGTTGGGGTGCAGCTGGAGTTGAACCACCGGGACTCACCTGAGTTGAACCCTAATGGTGATGCTTCTTGTGCTCATAACTTGGAGGCTTATTTGCATCTCATTGATGGGTGA 1242 0.5523 MATTSISNMVVTLEAKNPPKLQAAPAASSSSHTLVTTTRKPSIMTCKAAISTQLKPERPMPPKQEQLDISSVWRKLHGEDKWAGLLDPLDPGLRLEIIRYGEMAQATYDSFDYDPYSKYCGSCRYPHEKLFQYLDMTHMGYTVSRYIYATANVSLPSFFKRSRFPHKMWSDRANWAGYIAVSDDQTSKSLGRRDIAIAWRGTVTHTEWLADLTNYLRPLSPEIPCGDQGVKVEAGFMDLYTDKSPQCRFCKYSARHQVLSEVRKLVEKYEDEEVSITITGHSLGSALAVLSAFDLAETGLNVKKDGSGIHISVITFAGPRVGNWRFKQRLELDHGVKVLRVVNTHDIVPKSPGFIINESSPEWVYRLFKWLPWSYAHVGVQLELNHRDSPELNPNGDASCAHNLEAYLHLIDG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01554 413 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 31 413 - -
Arst6g01554 413 Gene3D alpha/beta hydrolase 72 413 IPR029058 -
Arst6g01554 413 FunFam Phospholipase A1-II 3 72 413 - -
Arst6g01554 413 CDD Lipase_3 146 387 - -
Arst6g01554 413 Pfam Lipase (class 3) 197 354 IPR002921 GO:0006629
Arst6g01554 413 SUPERFAMILY alpha/beta-Hydrolases 155 408 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01554 Arst-Chr6 15630243 15633268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01554 25 413 Acyl Lipid Metabolism Gene Families AT1G06800 54.637 3.28e-152 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01554 - - gmx:100815007 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01554 6 15630243 15633268 Arst6g01555 6 15630244 15633268 PCT