LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g01449	ATGATGACTTCTCAATTTCTCTCCCATCTAGATCATAAGGTTCTTTATTCTGACCTTACTGCACCTTCACACAAATCTAGATTTGGATTCAAGTTCCTCTGTCAAGGTCCTCCTGCCAAGTTTTGGGGAAAACATGCAAAGAAAAGTGGTGAATTTCGTCCAATATCTGCAACAACACATCAAGTTCTTGGATTCAAGGAGAGTGTGCCCTACTTCAAATGGCTACAAACTGTGAAGGATGATGTTGAACCAAATGAGGAACATGTTCTTCATCAGGTGGTGGTTACAAACGAGATAAGAAAGAAGATAAATGCGGTGAAAAGGATGTTAGGGTCAATGGAAGATGGAGAAATAAGCATATCAGCTTATGACACAGCATGGGTTGGTCTCGTGAGAGATGTTAATGGCGGAGGAGGGCCTGAGTTCCCATCTTGTCTTGAATGGATAGCCAGTAATCAGCTTTCTGATGGTTCTTGGGGTGATGCTCAACTTTTCAATGCCCATGATCGCATTCTTAACACCTTGGCTTGTGTTATTGCATTGAGAGCTTGGAATTTGCACCCCCAAAAGTCTGACATGGGGTTGAAGTTTGTTAAGGAAAATCTAAGCAAGCTTGAGGATGAGAATGTTGAACACATGCCAATCGGATTTGAAGTAGCTTTCCCTTCTCTTCTCGACTTGGCTCGAAGTATGAATATTGAAGTGCCACATGATTCTCCTATCTTGAAACAAATCTTTGCCATGAGAGACCTAAAGCTCACAAAAATACCAATGGAGGTGCTTCATAAGGTGCCCACAACACTGCTTCATAGTTTGGAGGGAATGGCAAATTTGGATTGGAAAAGACTCTTGAAATTGCAGTCACAAGATGGTTCATTCTTGTTCTCTCCATCATCCACAGCCTACGCTTTCATGCAAACCAAAGATGAAAATGCTCTCAAATATTTGGAGAAAACTGTGAAAAGGTTTAACGGGGGAGTTCCAAACGTTTATCCGGTGGATTTATTTGAGCACATTTGGGCTGTTGATCGATTAGAACGTTTAGGTATTTCAAGATATTTTCAGACAGAAATTAAAGAATGTATGGAATATGTTTCAAGATATTGGACCGAGAAGGGTATTTGTTGGGCAAGAAATTCGGAAGTTCAAGATATTGACGATACTGCAATGGCATTTAGATTGCTAAGGTTACATGGCCACCAAGTTTCACCCGATGCATTCAAGCATTTTGAGAAAAGTGGCGACTTCTTCTGCTTTGCTGGACAATCAAATCAAGCTATAACTGGGATATACAATCTTCATAGAGCTTCTCAAGTGTTGTTTCCTGGAGAGAAGATTCTTGAGAATGCCAGACTTTTTTCGTCCAAATTTTTAACTGAGAAACGGTTGGCTAATGAGATAGTGGATAAATGGATCATAACAAAAGATTTGCCTGGTGAGGTGAGCTATGCTTTGGATGTGCCTTGGTATGCTAGCTTACCCCTGTTAGAGACAAGATTTTACATAGAACAATATGGCGGTGAAAATGATATTTGGATTGGCAAGTCACTTTACAGGATGCCCTACGTGAATAATGATATTTATCTAGAGCTTGCTAAATTAGATTACGGCAACTGCCAAGATATGCTCTCTGTAGAATGGGAGAAAATCCAAAGGTGGTACTTGGAAACAGGATTAGAGGAATTTGGAGTGAGCAAAGAAAGTGTTCTGCAAAGTTATTTTGTGGCGGCAGCCAGCATGTTCGAGCCTGAGAAGTCCCTAGAGCGACTCGCATGGGCTAAAACCACGACTTTGATCGAGACATTGAAGTCCTATACAGGGGATAAAGAAGCAAGGAGGGTTTTTTTAGAACAATTCAATAACAGCATTAACAGACAAGATTTTCCAAAGAAGTGGCTAGATAAGAGCAACGAAACAGAAAAACTTGTTTGCATTTTGCTGATAACTATTGAGTATCTTGGATTGGAGTTTTTTCGAACTCGTGGGCAGGAAATTTCTCATTATTTGAATCAAATTTGGCAAAGTTGGTTGTTGAGTTGGCAAAAAGAAGGAAGCAGCTCCACAAGGGAAGCGGAGCTGATTTTGAAAACCATACATATAATGAGTGGCTGTTGGTCACAAGAGCTACAGCTAAACCTTCAGTATCAGAAATTGCTGCAAGTCACTAACAAAGTTTGCCATAAACTCAGAGATTACCAAAGTAGTAAGGAGGCAAATGTGAATGGCAGCTGCAACATGAGTGGAACCAGAGTCACTACACCACAAATAGAATCAGAAATGCAAGAGCTTTCGCAAACAGTGCTCCAAAATTCCCCAGATGGCATTCAGAATCAACCCCGTGTTAAGAATTCATTTCTAATGGTGGCCAAGAGTTTCTACTATGCTGCCTATTTTGACTATCAGACAATTATATCACACATTGACAAAGTTCTATTTCAAAAAGTGATGTAA	2451	0.4023	MMTSQFLSHLDHKVLYSDLTAPSHKSRFGFKFLCQGPPAKFWGKHAKKSGEFRPISATTHQVLGFKESVPYFKWLQTVKDDVEPNEEHVLHQVVVTNEIRKKINAVKRMLGSMEDGEISISAYDTAWVGLVRDVNGGGGPEFPSCLEWIASNQLSDGSWGDAQLFNAHDRILNTLACVIALRAWNLHPQKSDMGLKFVKENLSKLEDENVEHMPIGFEVAFPSLLDLARSMNIEVPHDSPILKQIFAMRDLKLTKIPMEVLHKVPTTLLHSLEGMANLDWKRLLKLQSQDGSFLFSPSSTAYAFMQTKDENALKYLEKTVKRFNGGVPNVYPVDLFEHIWAVDRLERLGISRYFQTEIKECMEYVSRYWTEKGICWARNSEVQDIDDTAMAFRLLRLHGHQVSPDAFKHFEKSGDFFCFAGQSNQAITGIYNLHRASQVLFPGEKILENARLFSSKFLTEKRLANEIVDKWIITKDLPGEVSYALDVPWYASLPLLETRFYIEQYGGENDIWIGKSLYRMPYVNNDIYLELAKLDYGNCQDMLSVEWEKIQRWYLETGLEEFGVSKESVLQSYFVAAASMFEPEKSLERLAWAKTTTLIETLKSYTGDKEARRVFLEQFNNSINRQDFPKKWLDKSNETEKLVCILLITIEYLGLEFFRTRGQEISHYLNQIWQSWLLSWQKEGSSSTREAELILKTIHIMSGCWSQELQLNLQYQKLLQVTNKVCHKLRDYQSSKEANVNGSCNMSGTRVTTPQIESEMQELSQTVLQNSPDGIQNQPRVKNSFLMVAKSFYYAAYFDYQTIISHIDKVLFQKVM	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g01449	816	Pfam	Terpene synthase, N-terminal domain	279	485	IPR001906	GO:0010333\|GO:0016829
	Arst6g01449	816	Gene3D	-	122	334	-	-
	Arst6g01449	816	Pfam	Terpene synthase family, metal binding domain	529	683	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Arst6g01449	816	SUPERFAMILY	Terpenoid synthases	524	805	IPR008949	-
	Arst6g01449	816	SFLD	Terpene Cyclase Like 1 N-term	93	519	-	-
	Arst6g01449	816	SFLD	Terpene Cyclase Like 1 N-term	93	519	-	-
	Arst6g01449	816	FunFam	Ent-copalyl diphosphate synthase, chloroplastic	311	536	-	-
	Arst6g01449	816	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	290	510	IPR008930	-
	Arst6g01449	816	PANTHER	ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC	97	814	-	-
	Arst6g01449	816	SFLD	Terpene Cyclase Like 1 N-term - Enzymatic	93	519	-	-
	Arst6g01449	816	SFLD	Terpene Cyclase Like 1 N-term - Enzymatic	93	519	-	-
	Arst6g01449	816	Gene3D	Farnesyl Diphosphate Synthase	539	816	IPR008949	-
	Arst6g01449	816	FunFam	Ent-copalyl diphosphate synthase	122	334	-	-
	Arst6g01449	816	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	123	305	IPR008930	-
	Arst6g01449	816	Gene3D	-	105	536	IPR036965	GO:0010333\|GO:0016829

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst6g01449	Arst-Chr6	14512615	14520291	Dispersed/Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g01449	K04120		-	gmx:100807519	1054.28

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst6g01449	6	14512615	14520291	Arst6g01449	6	14512615	14520291	ECH