Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01436 ATGTTGAATCACTCAAGCTCCGGCGGCCGCACCAATGGAGTCCGAGTCGTCGTCGCCGGCGACCGAGGAACCGGAAAATCCAGCCTCATCGCCGCCGTAGCCTCCGAGTCCTTCTCGGAGACCGTGCCGCCGGTGCTCCCTCTCACTGTCTTGCCAACCGATTTCTACCCCGACAACGTCCCCATCACCGTCGTCGACACGTCTTCAAGCTTAGAGAAACAGGGGAAGCGCAATGAAGAATTGAAGCAGGCTGATGTGGTGGTTTTAACGTATGCTTGCAATGAGCCTTCGACCTTTTCGCGGTTGAGTTCTTACTGGTTGCCGGAACTGGAGAGGCTGGAGGTGAAGGTGCCTGTAGTTGTGGTTGGTTGCAAGCTAGATCTGCATGATGAAAGCCAGCAAGTGAGCTTAGAGCGCCTCATGAATCAGCTCCTACAACAGTTCAAGGAAATTGTAACCTGCATTGAATGCTCAGCAGTTACACTATACCAGGTCCCTGAAGTTTTTTATTTTGCCCAAAAAGCGGTACTACATCCAATAGATCCATTATTTGATCAAGAAAGTCAAGCTTTAACAGATCGATGTGTTAGGGCATTGAGAAGAATATTTGTTCTTTGTGATCGTGACATGGATGATGCCCTCAGTGACACAGAACTAAATGAGTTCCAGGTTAAATGTTTTGATGCCCCATTGCAGCCATCTGAAATAAATGGGGTCAAAACTGTTGTACAACAGAACGTACCTGAAGGAGTCAACTCAAATGGTCTTACTTTTCCAGGATTTCTTTATGTCCATAGTATGTTCCTTAGGAAAGGGCGCCCAGAGACATTATGGGCTGTTCTAAGAAACTATGGATATGATAATGATTTAAAACTCAGGAATGATTCCCTTCCAGTTCCGTCTAAGAATGCTTCTGATCAGAGTGTGGAGCTAACAAATGAAGCTGTAGAATTTCTGAATGGTATCTTCCGATTATTGGACACAGATAAAGATCGAGCCTTACGGCCTGCTGAAGTTGATAAGCTATTTTGTACTGCTCCATCAAGAAATGACATGGGTTACATAACACTCAACGGATTTTTGTCCCAGTGGGCCCTCATGACATTGCTCGATCCACCATGTAGTGTGGCTAATTTGATTTACATTGGATATAGTGGCAATCCAGCTGCAGCACTACGTGTTACTCGCAGAAGATCAGTCGATCGCAAGAAGCAAGCAACAGAAAGGAATGTATTCCAATGCTATGTTTTTGGTTCTAAGAATTCTGGGAAATCTGCTCTCTTGGATTCATTTTTGGGAAGGCCATTTTCAAATAATTATACTCCGACAACAGCTGAACAGTTTGCAGCAAATACCATTGAATTAATACGGGGAACCAAGAAAGTTCTTGTGCTGCGGGAGATTCCGGAAGGGGAAGTGCCGAAAGTTTTGTTAAATCAGGATTATTTGGCAGCATGTGATGTAGCTATCTTCGTGTATGACAGCTCAAATGAACATTCATGGAAGAAATCTAGAGATATGCTTGAGCAGGTTGCAAGACAAGGAGAACTCACTGGCTATAGAGTTCCATGCCTCCTCATTGCTGCCAAGGATGATTTAACCCCATATCCAAGGGCAGTACAAGATTCAGTTAAGGCAACTCAGGAACTAGGAATAGAGGCACCTATTCACTTGAGTATGAAATTAGGTGATTCAAGCAATGTGTTCCATAGGATTGTTAGTGTTGCAGAACACCCTCATTTAAGCATTCCAGAAACAGAGATTGGGAGGAAAAGAAAGCAATATCATCGGCTTCTTCAAAACACACTCATTTTTGCATCAGTTGGAACTGCTATGGCTGTTGTTGGTGTGGCGGCATTGCGTGCATATGCAGTGAAAAAGAAATCTTCTGGTTAG 1896 0.4436 MLNHSSSGGRTNGVRVVVAGDRGTGKSSLIAAVASESFSETVPPVLPLTVLPTDFYPDNVPITVVDTSSSLEKQGKRNEELKQADVVVLTYACNEPSTFSRLSSYWLPELERLEVKVPVVVVGCKLDLHDESQQVSLERLMNQLLQQFKEIVTCIECSAVTLYQVPEVFYFAQKAVLHPIDPLFDQESQALTDRCVRALRRIFVLCDRDMDDALSDTELNEFQVKCFDAPLQPSEINGVKTVVQQNVPEGVNSNGLTFPGFLYVHSMFLRKGRPETLWAVLRNYGYDNDLKLRNDSLPVPSKNASDQSVELTNEAVEFLNGIFRLLDTDKDRALRPAEVDKLFCTAPSRNDMGYITLNGFLSQWALMTLLDPPCSVANLIYIGYSGNPAAALRVTRRRSVDRKKQATERNVFQCYVFGSKNSGKSALLDSFLGRPFSNNYTPTTAEQFAANTIELIRGTKKVLVLREIPEGEVPKVLLNQDYLAACDVAIFVYDSSNEHSWKKSRDMLEQVARQGELTGYRVPCLLIAAKDDLTPYPRAVQDSVKATQELGIEAPIHLSMKLGDSSNVFHRIVSVAEHPHLSIPETEIGRKRKQYHRLLQNTLIFASVGTAMAVVGVAALRAYAVKKKSSG 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01436 631 Pfam EF hand associated 346 405 IPR013566 -
Arst6g01436 631 PIRSF Miro 10 630 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Arst6g01436 631 Pfam EF hand associated 230 314 IPR013567 -
Arst6g01436 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 211 IPR027417 -
Arst6g01436 631 CDD Miro2 408 587 - -
Arst6g01436 631 ProSiteProfiles Miro domain profile. 409 578 IPR020860 GO:0003924|GO:0005525
Arst6g01436 631 ProSiteProfiles Miro domain profile. 11 178 IPR020860 GO:0003924|GO:0005525
Arst6g01436 631 SMART ras_sub_4 11 179 - -
Arst6g01436 631 FunFam Mitochondrial Rho GTPase 186 290 - -
Arst6g01436 631 SMART rho_sub_3 16 179 IPR001806 GO:0003924|GO:0005525
Arst6g01436 631 FunFam Mitochondrial Rho GTPase 476 577 - -
Arst6g01436 631 ProSiteProfiles small GTPase Rab1 family profile. 407 626 - -
Arst6g01436 631 SMART rab_sub_5 14 179 - -
Arst6g01436 631 Pfam Ras family 416 541 IPR001806 GO:0003924|GO:0005525
Arst6g01436 631 Pfam Ras family 15 176 IPR001806 GO:0003924|GO:0005525
Arst6g01436 631 Gene3D - 10 181 IPR027417 -
Arst6g01436 631 Gene3D - 292 469 - -
Arst6g01436 631 PRINTS Transforming protein P21 ras signature 14 35 - -
Arst6g01436 631 PRINTS Transforming protein P21 ras signature 154 176 - -
Arst6g01436 631 PRINTS Transforming protein P21 ras signature 115 128 - -
Arst6g01436 631 FunFam Mitochondrial Rho GTPase 11 181 - -
Arst6g01436 631 SUPERFAMILY EF-hand 182 365 IPR011992 -
Arst6g01436 631 Gene3D - 477 576 IPR027417 -
Arst6g01436 631 PANTHER RHO FAMILY GTPASE 413 575 IPR003578 GO:0005525|GO:0007264
Arst6g01436 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 583 IPR027417 -
Arst6g01436 631 Gene3D - 186 290 - -
Arst6g01436 631 ProSitePatterns EF-hand calcium-binding domain. 207 219 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01436 Arst-Chr6 14341631 14347545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01436 3 629 EF-hand Containing Proteins AT3G63150 59.688 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01436 K07870 - gmx:100803790 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01436 6 14341631 14347545 Arst6g01436 6 14341631 14347545 PCT