Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01420 ATGGCACAAAAACTCTTGGCAGCTTTCCTCCTCCTCCTCTTCTCCTTCGCCATCACCGTCTCTTCAGCTCAGAAATCATTCAGACCAAAAGCATTGGTCATCCCAATCAAGAAGGACACTTCCACAAACCAGTACCTCACAACAATCCGGCAGCGCACCCCTCTCGTCCCCGTCTCCCTCGTCCTTGACCTCGGCGGCCAGTTCCTCTGGGTCGACTGCGACAAAAACTACGTCTCCTCCACCTACCGCCCCGCCCGCTGCGGCTCCGCCCAGTGCTCCCTCGCCGGCTCCACCTCCTGCGGCACCTGCAACGCCCCTCCCCGCCCAGGATGCAACAACAACACCTGCGGCCTCATACCGGACAACACCATCACCCACACCGCCACCGGCGGCGAGCTCGCCGAAGACGCCGTGTCCGTACAGTCCACTAACGGCTTCAATCCTGGCCAAAACGTCACCGTTTCGCGCTTCCTCTTCTCCTGCGCACCCACTTTCCTCCTCAAAGGCCTCGCTAGCGGCGTCTCCGGAATGGCGGGTCTCGGAAGGACGAAAATCGCACTTCCCACGCAGTTCGCCTCCGCTTTCAGCTTCGCCAGAAAATTTGCCGTTTGCTTATCATCAAACGGCGTCGTTTTCTTCGGAGATGGACCGTACGGTTTCCTCCCGAACGTTGAGTACGATTCGAAATCTCTAACCTACACACCTCTCTTCATCAACCCCGTGAGCACCGCCTCCGCTTACTCCCAAGGAGAACCCTCCGCTGAGTACTTCATCGGCGTGAGTTCCATTAAAGTTGACCAAAATGTGGTCAAAGTCAAATCCAGCTTGTTGACCATCAACAAGACCAGCGGCGTGGGTGGAACGAAGATCAGCACTGTAAACCCTTACACGGTTCTAGAAGATTCGATCTTCAACGCCTTGGTTAAGTCCTTCGTGAATGCCTCGGCTGCAAGGAACATAACAAGGGTGGCTTCGGTGAAGCCGTTCGGAGCATGCTTCAGCACGGAGAACGTGTTCAGCACGCGCTTGGGGTACGCGGTTCCAACAATCGAGCTCGTTCTTGAAAACGCGAAATTGAGTTGGAGCATATTCGGTGCTAACTCGGTGGTTCAAGTGAGTGATAAAGTGATATGTCTTGGGTTCGTGAACGGTGGGAAGAACCCTACAACCTCCATCGTGATCGGAGGGTATCAGTTAGAGAACAATCTTTTGCAGTTCGATCTGGCTGCTTCCAGATTGGGATTCAGCTCTTTGCTCTTCGGAAGACAAACCACGTGTTCCAACTTCAATTTCACCTCCACCGCTTAA 1308 0.5459 MAQKLLAAFLLLLFSFAITVSSAQKSFRPKALVIPIKKDTSTNQYLTTIRQRTPLVPVSLVLDLGGQFLWVDCDKNYVSSTYRPARCGSAQCSLAGSTSCGTCNAPPRPGCNNNTCGLIPDNTITHTATGGELAEDAVSVQSTNGFNPGQNVTVSRFLFSCAPTFLLKGLASGVSGMAGLGRTKIALPTQFASAFSFARKFAVCLSSNGVVFFGDGPYGFLPNVEYDSKSLTYTPLFINPVSTASAYSQGEPSAEYFIGVSSIKVDQNVVKVKSSLLTINKTSGVGGTKISTVNPYTVLEDSIFNALVKSFVNASAARNITRVASVKPFGACFSTENVFSTRLGYAVPTIELVLENAKLSWSIFGANSVVQVSDKVICLGFVNGGKNPTTSIVIGGYQLENNLLQFDLAASRLGFSSLLFGRQTTCSNFNFTSTA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01420 435 FunFam Basic 7S globulin 25 215 - -
Arst6g01420 435 Gene3D Acid Proteases 216 433 IPR021109 -
Arst6g01420 435 FunFam Basic 7S globulin 216 433 - -
Arst6g01420 435 Pfam Xylanase inhibitor C-terminal 255 416 IPR032799 -
Arst6g01420 435 SUPERFAMILY Acid proteases 37 426 IPR021109 -
Arst6g01420 435 Gene3D Acid Proteases 29 215 IPR021109 -
Arst6g01420 435 ProSiteProfiles Peptidase family A1 domain profile. 45 416 IPR033121 -
Arst6g01420 435 Pfam Xylanase inhibitor N-terminal 45 215 IPR032861 -
Arst6g01420 435 CDD xylanase_inhibitor_I_like 51 419 IPR033868 -
Arst6g01420 435 PANTHER ASPARTYL PROTEASE-RELATED 7 433 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01420 Arst-Chr6 14226850 14228407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01420 18 417 Miscellaneous Gene Families AT1G44130 22.038 1.19e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01420 - - gmx:100797018 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01420 6 14226850 14228407 Arst6g01420 6 14226850 14228407 ECH
Arst6g01407 6 13378891 13380406 Arst6g01420 6 14226850 14228407 PCT