Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01400 ATGTTACCTCTGACTATGAGTTTGATGAGGGTGCTGGGAAGTGGGAAACTGTTCCCACCGGAACACATAGTCACCGATTCAGAGGACATACCTTTTGGAACACTGTGGTGGTTTGTGTACGCTGGAATTTCATGTTTTCTTGTCCTCTTCGCTGGGATTATGTCTGGTCTCACCCTCGGTTTGATGTCTCTTGGTCTCGTTGACCTTGAGATTCTTCAGCGTAGTGGCACTTCCACTGAGAAAAAACAAGCTGCTGCTATTTTGCCTGTTGTTAAGAAACAGCACCAGTTGCTTGTTACTTTGCTTCTTTGTAATGCCTGTGCTATGGAGGCACTTCCTATCTACCTTGATAAAATTTTTCATCCTGTTGTTGCTGTTATTTTATCAGTAACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCTCAAGCTATATGCTCAAGATATGGACTCTATGTTGGTTCAAATTTTGTGGGACTTGTACGTGTTCTGATGATAATTTGTTTTCCAATTGCATACCCTATTGGAAAGGTTCTGGATATATTACTAGGACACAACGATGCACTGTTTCGGCGAGCGCAATTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGCGGTGAACTCACACACGATGAGACAACAATTATCAGTGGAGCACTTGATCTCACTGAGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACATTTTCTTTGGATGTTGCTTCCAAATTAGACTGGGAAGCAATCGGGAAAATTCTTGCACGAGGCCATAGTCGTGTCCCTGTATACAGCGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAGTCTTCTAACTGTAAGAGCTGAAACTGAGACTCCTGTTAGTGCTGTTTCGATCCGGAGAATTCCAAGGGTTCCAGCAGATATGCCTTTATATGACATCCTAAATGAGTTTCAGAAAGGAAGTAGCCATATGGCCGCCGTAGTCAAGGTTACAAGAGATAGAAACAGCACTCAGGCTAATGGAGACACTGACAAATCTAAGGATAATGAAGTTTCCAAGCACAATTCTCAACTAACTATGCCATTGCTAGCAAAGTCTTCCGACAAATCGGAGAGTGTTGTCATCAGCATTGACAAAACTCATAAGCATGCTGCAGACAAACAATATCAACAAAATGGAACCGCAACAAACGGTGTTCACCATTTTTGTGAGAACACTGATGATGGTGAAGTTATTGGCATCATAACACTGGAGGATGTTTTCGAAGAACTCTTGCAGGAAGAAATCGTGGATGAAACTGATGTATATGTAGATGTACATAGAAGAATACGTGTAGCTGCTGTTGCAGCTGCTACATCAGTGGCACGAGTTCCATCTGGCCGGAAGTTGACAGTTCACAAGCCTGTAGGGAATCAAGCAAGCAAGTGA 1434 0.4261 MLPLTMSLMRVLGSGKLFPPEHIVTDSEDIPFGTLWWFVYAGISCFLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTSTEKKQAAAILPVVKKQHQLLVTLLLCNACAMEALPIYLDKIFHPVVAVILSVTFVLAFGEVIPQAICSRYGLYVGSNFVGLVRVLMIICFPIAYPIGKVLDILLGHNDALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRDRNSTQANGDTDKSKDNEVSKHNSQLTMPLLAKSSDKSESVVISIDKTHKHAADKQYQQNGTATNGVHHFCENTDDGEVIGIITLEDVFEELLQEEIVDETDVYVDVHRRIRVAAVAAATSVARVPSGRKLTVHKPVGNQASK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01400 477 MobiDBLite consensus disorder prediction 334 361 - -
Arst6g01400 477 PANTHER METAL TRANSPORTER CNNM 23 451 IPR045095 GO:0010960
Arst6g01400 477 Pfam Cyclin M transmembrane N-terminal domain 43 214 IPR002550 -
Arst6g01400 477 Gene3D - 215 347 IPR046342 -
Arst6g01400 477 FunFam DUF21 domain-containing protein At5g52790 389 434 - -
Arst6g01400 477 Gene3D - 348 434 IPR046342 -
Arst6g01400 477 MobiDBLite consensus disorder prediction 340 354 - -
Arst6g01400 477 CDD CBS_pair_CorC_HlyC_assoc 229 330 IPR044751 -
Arst6g01400 477 ProSiteProfiles CNNM transmembrane domain profile. 33 215 IPR002550 -
Arst6g01400 477 SUPERFAMILY CBS-domain pair 219 428 IPR046342 -
Arst6g01400 477 FunFam DUF21 domain-containing protein At4g14240-like 215 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01400 Arst-Chr6 13333743 13338056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01400 K16302 - gmx:100777230 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01400 6 13333743 13338056 Arst6g01400 6 13333743 13338056 ECH