Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01381 ATGAATTTCTTTAAATCCATTCTCTCCGACGATCCAGATTCCCCTGGATCTGAACATGATTCCGACAATGCGCCTCACCCGCAAAACGCAACCGATACTGATCCCTCCACATCCGACACCGCCAAGGCCACCGCCGACCACAGTGACGGCGTCGATGGCAGCGGGTGGATTCGGTTCGGTGGCCTGATCAAAACCCTAACCTCCAAATCCGAATCGATAATCGAGACGTACCGCCGGGACCTCCAAGAATTCGGCACGGGACTCAAGAAGGAGATCGAGGTCGCCCATGGCTCCCTCGAGACGGTGGGCCAGGCCATCGATCAGTTGGGATCTACTGTTGTCAAAGGAACGGCCCAGATCATCTCCCAAGGAAAGGAAGCAATCCTAGCCGCCGATCTCGATTCCGATTACAATAGCAACAAAAGCACTAAAAGCCCTAGCAAAGATAGTAGTTGCTCGAATTTGAAAGGGTATAGTAGGTTTGAAGCTCAGATTCGTGCTATTCAGGGTGATGCTAGCACTTACAATGATGAGCCTGAGGATTTGGAAGAGTATGGAAAGTGGAAGTCAGGATTTTCGTTGGAAGGGAAGGATGAGGAATTGGAGGATTTGCTTAGTGAGAATGATGCTATGGAGAGTATTTACAAGATGCTTGTTCCGAATAGCGTGGATAATGAGAGTTTCTGGTTAAGGTATTTCTATAAGGTATATAAGCTGAAGAAAGCTGAGGATGTGAGGGCTAGGCTTGTGACGACAATGTCAAGGGAAGAGGAGGATTTGAGTTGGGATGTAACAGATGTTGAAGATGGTGGTGGTGGTGGTAGTAAATTTGGTGAAAAGGGTGTGGTCGAAACAAAGAAATTGAGTGTGGAAGTGGGGCAAATTCTTCTCAGGAGGAGTCTAAGGTGGAAAAGGGAAATAGTTCATTGCAAAGTGAAAGTAAGGAACATGGCAATGATTCTGTTGGGGAAACTAAAGTTGAGAGTTCAGATTGCTCAAAAGGCGGATGACGGAAGCAACTCATGCAAGGAAGTCGTGAAGGAAGTGGTTGAATCTGGGAAGAATAGTGATTATGCAGCTGGTTCTGATGAGAAAGTGATAGTGGAAACAAAAGTTGATGATGGAAAACCTCCGGTGGTTGAGGCAAGTAAGAGCCTGGCACACGAGGAAGAGGAGGATCTCGGTTGGGATGAGATTGGGGATCTCAGTAGTATTGATGAAAAGAAGACAAGTCCGCCACGGAGTGGAAGCCCAAGCAAAGTTGATGTGCGGAAGCTACTGAGTGTTGCAGAGGAAGAAGAAGCCTTGAGTTGGGACATTGAAGATGATGATGATGATGCTGTTAAGTCTTGA 1353 0.4715 MNFFKSILSDDPDSPGSEHDSDNAPHPQNATDTDPSTSDTAKATADHSDGVDGSGWIRFGGLIKTLTSKSESIIETYRRDLQEFGTGLKKEIEVAHGSLETVGQAIDQLGSTVVKGTAQIISQGKEAILAADLDSDYNSNKSTKSPSKDSSCSNLKGYSRFEAQIRAIQGDASTYNDEPEDLEEYGKWKSGFSLEGKDEELEDLLSENDAMESIYKMLVPNSVDNESFWLRYFYKVYKLKKAEDVRARLVTTMSREEEDLSWDVTDVEDGGGGGSKFGEKGVVETKKLSVEVGQILLRRSLRWKREIVHCKVKVRNMAMILLGKLKLRVQIAQKADDGSNSCKEVVKEVVESGKNSDYAAGSDEKVIVETKVDDGKPPVVEASKSLAHEEEEDLGWDEIGDLSSIDEKKTSPPRSGSPSKVDVRKLLSVAEEEEALSWDIEDDDDDAVKS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01381 450 SMART wurzfinal6 188 240 IPR005607 -
Arst6g01381 450 SUPERFAMILY BSD domain-like 157 245 IPR035925 -
Arst6g01381 450 ProSiteProfiles BSD domain profile. 188 240 IPR005607 -
Arst6g01381 450 Coils Coil 194 214 - -
Arst6g01381 450 MobiDBLite consensus disorder prediction 385 422 - -
Arst6g01381 450 MobiDBLite consensus disorder prediction 1 54 - -
Arst6g01381 450 Pfam BSD domain 188 244 IPR005607 -
Arst6g01381 450 MobiDBLite consensus disorder prediction 21 44 - -
Arst6g01381 450 Gene3D BSD domain 149 250 IPR035925 -
Arst6g01381 450 PANTHER SYNAPSE-ASSOCIATED PROTEIN 17 395 - -
Arst6g01381 450 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01381 Arst-Chr6 13044252 13045931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01381 - - aip:107645366 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01381 6 13044252 13045931 Arst6g01381 6 13044252 13045931 ECH
Arst6g01375 6 12959037 12960818 Arst6g01381 6 13044252 13045931 PCT