Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01376 ATGGCGGCTGTAACTGCTGCTGTTCCTCGTACCGATCCGCCAATGGTCGTGTCGGATTCCTTCGCCAAGGACGCCATACTCGCCTGGTTCCGCGGCGAATTCGCTGCTGCAAATGCCATCATCGACGCCCTCTGCTCTCACCTAGCTGCCGCAGCCTCATCCTCCGACGAGTACGACGCCGTGTTCGCTGCCATACACCGCCGCAGGCTCAACTGGATTCCCGTCATCCAGATGCAGAAGTACCACTCCATTGCTGACGTGACTCTCGAGCTCCGCAAGGTCACCGAAAAGAAGACGGCGACGGCGGAGGAGGCGGAGGCGGAGAGTAATGGCGGCGGAGACGGTGAGAAGGGGAAAGTGGAGGAGGAAGTGACGGAGAGTGTTGGAAATGGCGAAGGCGAAGGCGAAGCTCAACAGAGTCATGAGGAGTATGAATCTCCAGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCACCCCAGTTTGACAAACATTAGCATATGTTCCAATCACGAAGAATGTGAAGGACGCTCATCACTGATAAAGTTGACAAAAGGTTTCCAAGCAAAGGAGTCAGTGAAGGGCCATATGGTTAATGTTGTGAAAGGATTGAAGTTATATGAAGCCATTTTCAATGACTCAGAAATATGTAAGCTGACTGATTTTGTAAACGAGATCCATGTGGCTGGCCAGAAAGGGGAACTCTCCGGTGAAACTTTCATACTATTCAACAAGCAGATGAAGGGGAACAAGAGAGAGCTGATTCAGCTAGGTGTTCCGATATTCGGGCAGATAAATGATGCAAAGAGCAACATAGAACCGATTCCAGCACTTCTTCATGGTGTCATTGATCACCTTATACAATGGAAGTTAATTCCAGAGTATAAAAGGCCAAATGGTTGTATCATTAACTTCTTTGAGGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCCCATCTGGACCAGCCTATATCAACCCTTCTTCTCTCTGATTCAACTATGGCTTTTGGACGTATCCTAATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAATAGTGCAGACATGGCAAGACACGTAATGTGTCCATCACCGAACAGAAGGATTAGCATCACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATGCCAGTCACTAACTCCTACCATGACAAACGCAATGACTCTTTGGCAACCCGGCATTGCTAGTCCATATGCTGTGCCAAATGGAGCTGTAAGCAGCTATGAGACTATGGACATGATGCCCAAATGGGGAATACTTCATGCTCCAATGGTCATGCTAACAAACCCTGTACACCCTATAGCAATGAACCCTGGCAAACTTCCTGGTGGCGCTGGGACTGGGGTTTTCTTGCCTTGGAAGGTAGCATCCAGGAAACCTGCAAGGCATCTCCCACCTCGAGCCCAAAAGGGACGCCTGATGGCATTATCATCGCCAACCAATTCACATATGGGAGAGTCAACTTCTGAACCCAGCATTACAGTTGGAGGTTAA 1566 0.4879 MAAVTAAVPRTDPPMVVSDSFAKDAILAWFRGEFAAANAIIDALCSHLAAAASSSDEYDAVFAAIHRRRLNWIPVIQMQKYHSIADVTLELRKVTEKKTATAEEAEAESNGGGDGEKGKVEEEVTESVGNGEGEGEAQQSHEEYESPESEITDSGSQEMHPSLTNISICSNHEECEGRSSLIKLTKGFQAKESVKGHMVNVVKGLKLYEAIFNDSEICKLTDFVNEIHVAGQKGELSGETFILFNKQMKGNKRELIQLGVPIFGQINDAKSNIEPIPALLHGVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPISTLLLSDSTMAFGRILMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRISITFFRVRPDSNQCQSLTPTMTNAMTLWQPGIASPYAVPNGAVSSYETMDMMPKWGILHAPMVMLTNPVHPIAMNPGKLPGGAGTGVFLPWKVASRKPARHLPPRAQKGRLMALSSPTNSHMGESTSEPSITVGG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01376 521 MobiDBLite consensus disorder prediction 496 521 - -
Arst6g01376 521 SUPERFAMILY Clavaminate synthase-like 198 394 - -
Arst6g01376 521 Gene3D - 188 402 IPR037151 -
Arst6g01376 521 MobiDBLite consensus disorder prediction 100 126 - -
Arst6g01376 521 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 298 395 IPR005123 -
Arst6g01376 521 MobiDBLite consensus disorder prediction 498 521 - -
Arst6g01376 521 MobiDBLite consensus disorder prediction 100 162 - -
Arst6g01376 521 Pfam 2OG-Fe(II) oxygenase superfamily 303 392 IPR044861 -
Arst6g01376 521 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 22 507 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01376 Arst-Chr6 12961583 13053633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01376 K10767 - gmx:100796344 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01376 6 12961583 13053633 Arst6g01376 6 12961583 13053633 ECH
Arst6g01376 6 12961583 13053633 Arst6g01382 6 13046789 13053632 PCT