Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01370 ATGATGACTATGATGACTACATCAATCAAATGGCAGAACATGGAAAACAACATCATGATCCTCCTCTTCTCTCTGTTGATCCCCTCCTCTGCTTCTTCTACAGGAACAAGCTCCATGAAGCCCAAATTGATCCCTTATTTTGATTCAACCCTTTCCCAAGCTGCATCCTTTATTGCTCACAGAGGCAGCACTGCAGTTCTTCACAGGTTCTTTCCTCCAAGGCCAGGGATCAACAAGATCCTTTGGTTTCTCTATGCTGACAATATCACAACTACTAAATGCGGCTTCAAGGTTATGGCTGCATCTTCTTACTCTTTGCAGAGTGGTAAGGCCAAACCTCAACAACTTGCTGTCTATTCAAGCCCTCCACAAGTGTTTCTTGGATCTTTTGTTGAGCATCAAATGTATTGCCACCTTCTCTGCGGCGTAAGGAATCTCGAAGCAATCGATGCTATTCGAACCCCTTATGCTGTAGGATTGGTTAAGGCTTTTGGCCTTCTAGAGTCCAAATGGGAGCAGCTTTGTGATGATCTTGAATGTGGCTTCCCAAGTATTGAAGTTTCAGATGTGGCAATGAGGGAAGATGTGATTAAAGCACTTGGAGGGCCTCAACTGGAATTGTCAAACAGAATAAGGTTAATTTGTAGAGGTAATAATGATAATTGGGGTGGTATTGTTTATAGATTGTGGCCAAATATTCGTTATATAAGGTGTGTTTGCACTGGAAGCATGATGCAGTATTATCCAAAGCTGAAGTATTATGCAGGAGAGGTACCTATTGTTGGAGGAGATTACTTTGCTTCTGAGTGCTGTGTTGGCATAAATTTAGACATAATGCAACCTCCTGAGACGACACGATTCGTGATACTTCCAACGGCTGCATACTTTGAGTTTCTTCCATTTAACATGAATGAGGAGAGCAATGATGCTGCTGATGAAACAGTGGATCTTAGCAGTGTAGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTTATAGAGGATTATATCGCTATCGGTTAGGCGATGTAGTGAAAGTTGTTGGATTCTATAACAAATCTCCAGAAGTAGAATTTGTGATGAGAGCACCTAAAACTCATGCTGAGATTCTAACAGAGAAGGACTTGGTTTCAGCAATTGAAAACTTTCAACTTGCAGTAAGGGGTGCCATGATGAAAATAGAGATAGTTGAGTTTGCAAGTTTCTTGGACCAGGAATCACAGCCAAAGCAGATGAAGGTGTTTGCAGAAGTTCAAGAGGAATCTGATTTCATGGAGGACAAACTAGAAGAGTCAACAATGATATTGAAAAGGTGTATTTCCTCACTTGAAAGTGGCTTTGGAGCTTTGTACAAGGTGGAGAAGGATAAGGGTCAAGTAGGGAACTTAGTGGTATTCATTCTAAGGCCTGGAGCATTTGATAAGTTATATGAAGTAGCCATTAGAAATGGAACACCAGCTAGTCAATATAAACCACCCAAGATTATAAGAAATCATGAAATTGTCACACTCTTGCAAAAATATAGTTTTGTGACATTGAATGATATTTAG 1551 0.4055 MMTMMTTSIKWQNMENNIMILLFSLLIPSSASSTGTSSMKPKLIPYFDSTLSQAASFIAHRGSTAVLHRFFPPRPGINKILWFLYADNITTTKCGFKVMAASSYSLQSGKAKPQQLAVYSSPPQVFLGSFVEHQMYCHLLCGVRNLEAIDAIRTPYAVGLVKAFGLLESKWEQLCDDLECGFPSIEVSDVAMREDVIKALGGPQLELSNRIRLICRGNNDNWGGIVYRLWPNIRYIRCVCTGSMMQYYPKLKYYAGEVPIVGGDYFASECCVGINLDIMQPPETTRFVILPTAAYFEFLPFNMNEESNDAADETVDLSSVEVGKMYEVVVTTYRGLYRYRLGDVVKVVGFYNKSPEVEFVMRAPKTHAEILTEKDLVSAIENFQLAVRGAMMKIEIVEFASFLDQESQPKQMKVFAEVQEESDFMEDKLEESTMILKRCISSLESGFGALYKVEKDKGQVGNLVVFILRPGAFDKLYEVAIRNGTPASQYKPPKIIRNHEIVTLLQKYSFVTLNDI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01370 516 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 26 507 IPR004993 -
Arst6g01370 516 Pfam GH3 auxin-responsive promoter 27 499 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01370 Arst-Chr6 12942070 12944165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01370 33 507 EF-hand Containing Proteins AT1G23160 31.762 6.38e-77 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01370 K14487 - gmx:100786829 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01370 6 12942070 12944165 Arst6g01370 6 12942070 12944165 ECH