Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01362 ATGGCATCGCCCTTCATCTTCCTAATTTTCTTCTTCATATTCAGAGTGCATCATGCTATATTGGATCCCAATGATTTCTTGGCTCTTCAATCTATTCGTAAATCGCTTCACGATGTTCCCGGCTCTAACTTCTTTTCTTCTTGGGACTTCACCTCTGATCCATGCACATTCTCCGGCGTCTTCTGCCATGCCGATAGAGTCGTTGCTCTAAACCTTGGCGATCCCCGCGCCGGCTCCCCCGGCCTCACCGGAAAACTTGACCCCGCACTCTCAAAGCTCTCCGCTCTCGCTGAATTAACAGTCGTCCCCGGCCGAATCTACGGCCATCTCCCGCCCTCTCTCTCTGCACTTACCAATCTCCGATTCCTTGGCATTAGTCGTAATTTCGTCTCCGGCGACATTCCGGCAGGTTTAGGCAACCTTCGCAGCCTCAGAACTCTCGATCTCAGCTACAACCAGCTCTCCGGAACAATCCCCCCGGCGATTGGAAACCTCCCGGAGCTCGTCAACGTCGTCCTCTGCCATAACCGTCTCACCGGTTCGGTTCCCAAATTCTCATCTCAAACGCTAACCCGGCTCGATCTGAAACATAACACTCTCTCCGGTTCGATCGAACCGGATTCCCTCCCACCCTCACTCCACTACCTCTCCCTCTCGTGGAATTGGTTCACTGGACCGGTAGACCGGTTACTAAGCAGGCTCAACCAGCTAAACTACCTCGACCTAAGCCTGAACCGGTTCACCGGTTCAATTCCAGCTCAACTCTTTACGTACCCCCTAACAAACCTCCAGCTCGAGAGGAACCAGTTCTCGGGTCCGGTCCAACCGTTCAACGACGTTTCGATCCAGACCGTTGATCTTAGCTATAACAGATTCTCCGGTGAGATATCGCCCATGCTGGCGAACGTGCAGTATCTTTACCTGAACAACAACGGGTTTTCCGGGCAGGTCCCTGCCAGCTTCGTTGACCGGTTGCTGGCGGCGAGTATAGAGATTCTTTATCTTCAGCATAATTACCTGACCGGAATAGCGATAAGTCCCACGGCGGAGATTCCGGTGAGCAGCTCGCTTTGCGTTCAGTATAACTGTATGGTGCCGCCGGTGCAGACGGGGTGTCCGGTGAGGTCCGGGACGCAGAAGATTCGGCCTGCTGAGGAGTGCAATCAATGGAGGGGATGA 1179 0.536 MASPFIFLIFFFIFRVHHAILDPNDFLALQSIRKSLHDVPGSNFFSSWDFTSDPCTFSGVFCHADRVVALNLGDPRAGSPGLTGKLDPALSKLSALAELTVVPGRIYGHLPPSLSALTNLRFLGISRNFVSGDIPAGLGNLRSLRTLDLSYNQLSGTIPPAIGNLPELVNVVLCHNRLTGSVPKFSSQTLTRLDLKHNTLSGSIEPDSLPPSLHYLSLSWNWFTGPVDRLLSRLNQLNYLDLSLNRFTGSIPAQLFTYPLTNLQLERNQFSGPVQPFNDVSIQTVDLSYNRFSGEISPMLANVQYLYLNNNGFSGQVPASFVDRLLAASIEILYLQHNYLTGIAISPTAEIPVSSSLCVQYNCMVPPVQTGCPVRSGTQKIRPAEECNQWRG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01362 392 Gene3D Ribonuclease Inhibitor 189 376 IPR032675 -
Arst6g01362 392 SMART LRR_typ_2 300 323 IPR003591 -
Arst6g01362 392 SMART LRR_typ_2 141 165 IPR003591 -
Arst6g01362 392 SMART LRR_typ_2 234 258 IPR003591 -
Arst6g01362 392 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Arst6g01362 392 Gene3D Ribonuclease Inhibitor 24 188 IPR032675 -
Arst6g01362 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 17 392 - -
Arst6g01362 392 Pfam Leucine Rich repeat 187 202 IPR001611 GO:0005515
Arst6g01362 392 PRINTS Leucine-rich repeat signature 144 157 - -
Arst6g01362 392 PRINTS Leucine-rich repeat signature 234 247 - -
Arst6g01362 392 FunFam Nuclear pore complex protein NUP107 23 184 - -
Arst6g01362 392 SUPERFAMILY L domain-like 45 363 - -
Arst6g01362 392 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01362 Arst-Chr6 12831525 12833237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01362 8 342 Receptor kinase-like Gene Family AT5G62230 29.395 6.83e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01362 - - gmx:100817314 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01362 6 12831525 12833237 Arst6g01362 6 12831525 12833237 ECH
Arst6g01362 6 12831525 12833237 Arst6g01362 6 12831525 12833237 PCT