Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01358 ATGAAGCGAGTTTGGAGATTCACTTCAGACGCAGTAGCGCAAGCCGAACACTTCTGCTTCCACTCCCATGGCATCCCTAACCCTAAACCTAATATTCCGTCCTTTACTACCACCACTGCCGCATTCACATCGCCTGGCCTCACTCGCCGCCACTGCACCTCCGGTACCCCTCCTCCTCCTCACCCGCTTCAAGATATTACTCCCCTCTTCATCGAGAAACGCAGGCTTCCGTTCGGAGAGGATCTCATCAATAAAGCATCGGTTTTGAAGAACCAACTGGTTCTCGAAGCCTCGGATTCCAATCGGGTAATTGAGATCCTCGATGAGAACTCTGCATCACTGATTGAAAGTCATGTAGGTGGATCTGTGCTGCTCGAGCTCTTGAATCAGTTGGATTCGTGGCCTTCCTTGGCCCTTCAGGTGTTTGATTGGAGGAGGGAGAAGAAGAATTCTGGTGTTGACTCCCCAATGAGTGTATATGAGTATTCTAAGGGCATAAAAGCTGCAGGTAGATGTAAAGATGTTCATCATGCCGTTGAGATCTTTCGAGACGCTGCGAAGAAGGGCATGAGAACGACCAGCACTTACAATGCATTGATGAGTGCTTTTATGTTCAATGGTCTTGCAAAGATGTGTCACGAGTTGTTCTGTGATATGAAGAAGCATGCAGCTTGTCCTCCTACAATTGCCACATACAATATTCTCATATCTCTTTACTCTCGCTTGGTGCTGGTGGATTACATGGAAGAAACATACCAGGCGATAAAAGAGTCGGACCTCCAACTCAGTGAGAATACTTATAATTATTTGATTGCTGGATATATCTCGGCTTCGATGTGGCATGACATGGAGAGAGTTTTTCAAATGATGAAGGGAGGCCCTGTCAAGCCTAACTTGAAAACCCACCTGCTAATGCTTCGAGGCTATGGACAATCAGGTAATCTGGAGAAGATGGAAGAGATGTATTCTCTAGTAAGGGATCATGTAAACAAAAAAGAAATTCCATTGATCAGGGCCATGATATGTGCGTATTGTAAAAGTTCAGATTCGGATAGAGTGAAGAAGGTAGAGGGATTGCTGAAGCTTATTCCACAAGAACATTACAGACCATGGTTGGACGCCTTGTTGATTAAGCTCTATTCCCAGGAGGACTGGTTAGAGGAAATGGAGATTACAATTAATGAGGCTTTTGAGCGCAGAACCCGGATAGCCTCAGCAAGTACTATGAGATGCATTACTGCAACTTATTATCGGTGTAATGCAATAGAAAGGCTAGAAAATTTTGTGAAACGTGCTGAATGTGCTGGGTGGAGAATCTGTCGGTCCTTGTATCATTTAGTTATTGCAGATGGTGTTGTACATGTGCAGTCTTTGGGAGATGAAGGGTCCCCAACACATTGA 1401 0.4511 MKRVWRFTSDAVAQAEHFCFHSHGIPNPKPNIPSFTTTTAAFTSPGLTRRHCTSGTPPPPHPLQDITPLFIEKRRLPFGEDLINKASVLKNQLVLEASDSNRVIEILDENSASLIESHVGGSVLLELLNQLDSWPSLALQVFDWRREKKNSGVDSPMSVYEYSKGIKAAGRCKDVHHAVEIFRDAAKKGMRTTSTYNALMSAFMFNGLAKMCHELFCDMKKHAACPPTIATYNILISLYSRLVLVDYMEETYQAIKESDLQLSENTYNYLIAGYISASMWHDMERVFQMMKGGPVKPNLKTHLLMLRGYGQSGNLEKMEEMYSLVRDHVNKKEIPLIRAMICAYCKSSDSDRVKKVEGLLKLIPQEHYRPWLDALLIKLYSQEDWLEEMEITINEAFERRTRIASASTMRCITATYYRCNAIERLENFVKRAECAGWRICRSLYHLVIADGVVHVQSLGDEGSPTH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01358 466 Gene3D Tetratricopeptide repeat domain 84 224 IPR011990 GO:0005515
Arst6g01358 466 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 263 297 IPR002885 -
Arst6g01358 466 Pfam PPR repeat family 192 237 IPR002885 -
Arst6g01358 466 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 192 226 IPR002885 -
Arst6g01358 466 Pfam Pentatricopeptide repeat domain 255 310 IPR002885 -
Arst6g01358 466 NCBIfam pentatricopeptide repeat 266 298 IPR002885 -
Arst6g01358 466 Gene3D Tetratricopeptide repeat domain 225 457 IPR011990 GO:0005515
Arst6g01358 466 PANTHER EXPRESSED PROTEIN 68 449 IPR044179 GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01358 Arst-Chr6 12820511 12823429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01358 157 388 Miscellaneous Gene Families AT4G11690 22.358 8.29e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01358 - - adu:107492858 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01358 6 12820511 12823429 Arst6g01358 6 12820511 12823429 ECH