Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01203 ATGACCCAGAGGATGGGAAAATGTGGAAGGGATGTCCCCCTTGAGACACAATTTATGCTCATTGAGAGCAATGGCAATGAGATTGACGAAGACAATTCTGCAACAATCTACATTGTTATGCTTCCTCTCCTTGAAGGCCAATTCCGTGCCGTCCTGCAAGGCAACGACAAGAACGAGCTGGAGATTTGTTTGGAGAGTGGAGACAAGGATGTTGTTACCAGGCAAGGCCTTAACCTTGTCTACATCCATGCTGGAACGAACCCCTTCGAAGTTATCAATCAGGCTGTGAAGGCCGTGGAAAACCGCATGCAAACTTTCTCTCATCGCGAGAAGAAAAGGTTGCCATCTTTTGTTGACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGATGTTACTGCCGACGGTGTTGAAGAAGGCCTGAAAAGTCTATCAGACGGAGGTACACCGCCACGGTTCATCATCATAGATGACGGTTGGCAACAGATTGAAAGTGAACCAAACGAAGCTGATGATTGCGTCGTACAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGTATAAAAGAAAATGCCAAATTCCAAAAGAAGAATGAACAGAACAATGAACAAGACTTAGGCCTGAAGCATGTCGTAGATGAAGCAAAGAAAAATTACAACGTGAAAAATATTTATGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAGAAGGGATGGAGCACTATGAAAGTGCATTGGCCTATCCAGTACAGTCTCCCGGCATACTCGGGAACCAACCCGACATCGTCATGGACAGCCTAGCTGTCCATGGCCTTGGTCTAGTGCACCCAAAGAAGGTCTTCGATTTCTACAATGATCTCCATGCTTACTTGGCTTCATGTGGAGTAGATGGAGTAAAGGTTGATGTTCAGAACATCATTGAGACCCTTGGTGCTGGACACGGCGGCAGAGTCATGCTCACACGCAGCTATCATCATGCACTCGAGGCTTCAATTGCTCATAACTTTCCTGATAATGGATGCATCGCTTGTATGTGTCACAACACTGATAGCCTCTATAGTTCTAAGCAGACTGCTGTTGTGAGAGCATCCGATGATTTTTACCCGCATGATCCGGCCTCTCATACCATCCATGTTTCATCTGTAGCATACAACACACTTTTCCTTGGAGAATTCATGCAGCCAGACTGGGACATGTTTCATAGTTTACATCCAGCAGCTGAGTATCACGCCGCAGCTCGCGCAATTGGTGGATGTCCAATCTATGTTAGTGACAAGCCAGGCAACCACGACTTTGATCTTCTTAAGAAGCTGGTTCTCCCTGATGGTTCAGTTCTCCGTGCTCAGTTACCCGGAAGGCCCACCCTCGATTGCCTCTTCGCCGATCCTGCAAGAGATGGGACGAGCTTACTCAAAATATGGAACTTGAACAAATACTCTGGAGTAGTGGGTGCATTTAACTGCCAAGGTGCTGGATGGTGTAGGGTAGAGAAGAGAATCCGCATCCATGATGCATCTCCTGGCACTCTCTCCAGCTTCGTTAGTGCCTCTGATGTCGATCTCATAGCTCAAGTCGCTGGTGCTGGTTGGCGTGGAGATGTTATTGCCTATGCTTACAGATCAGGTGACATAATTCGGCTATCAAATGGTACTTCAGTTCCGGTGATATTAAATGTTCTGGAGTATGAGCTGTTCCATTTCTGTCCTGTGGAGGAAATTACCTCAAGTATCTCGTTTGCAGCAATAGGACTTTTGGACATGTTCAACACTGGAGGAGCTGTGGAGCAAGTTGAAATCCATAAAGTTTCTGAGAACAACATGGAACTATATGATGATGAGGCTTCATCTGAAGTGACCAATGATCCGAGTTCTAACCGATCAGCAGCAGCAGCAGCAGCAACTATGTCTCTGAAAGTGAGGGGAAGTGGGAGATTTGGTGTATACTCCTCCCAACGGCCATTAAAGTGCACCGTCGGCGGAGCCAAAACCGAGTTCAAGTATGACTTGGATACTGGGTTGACAACATTTTCTATCCCAGTTCCTGATGAGGAGATGTATAAATGGTCAATACAGATCCAAGTTTGA 2103 0.4646 MTQRMGKCGRDVPLETQFMLIESNGNEIDEDNSATIYIVMLPLLEGQFRAVLQGNDKNELEICLESGDKDVVTRQGLNLVYIHAGTNPFEVINQAVKAVENRMQTFSHREKKRLPSFVDWFGWCTWDAFYTDVTADGVEEGLKSLSDGGTPPRFIIIDDGWQQIESEPNEADDCVVQEGAQFATRLTGIKENAKFQKKNEQNNEQDLGLKHVVDEAKKNYNVKNIYVWHALAGYWGGVKPAAEGMEHYESALAYPVQSPGILGNQPDIVMDSLAVHGLGLVHPKKVFDFYNDLHAYLASCGVDGVKVDVQNIIETLGAGHGGRVMLTRSYHHALEASIAHNFPDNGCIACMCHNTDSLYSSKQTAVVRASDDFYPHDPASHTIHVSSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHDFDLLKKLVLPDGSVLRAQLPGRPTLDCLFADPARDGTSLLKIWNLNKYSGVVGAFNCQGAGWCRVEKRIRIHDASPGTLSSFVSASDVDLIAQVAGAGWRGDVIAYAYRSGDIIRLSNGTSVPVILNVLEYELFHFCPVEEITSSISFAAIGLLDMFNTGGAVEQVEIHKVSENNMELYDDEASSEVTNDPSSNRSAAAAAATMSLKVRGSGRFGVYSSQRPLKCTVGGAKTEFKYDLDTGLTTFSIPVPDEEMYKWSIQIQV 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01203 700 Pfam Raffinose synthase or seed imbibition protein Sip1 1 683 IPR008811 -
Arst6g01203 700 Pfam Raffinose synthase or seed imbibition protein Sip1 1 683 IPR008811 -
Arst6g01203 700 Gene3D Aldolase class I 120 445 IPR013785 -
Arst6g01203 700 SUPERFAMILY (Trans)glycosidases 116 449 IPR017853 -
Arst6g01203 700 PANTHER - 1 697 IPR008811 -
Arst6g01203 700 PANTHER - 1 697 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01203 Arst-Chr6 11110992 11115092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01203 1 699 Glycoside Hydrolase AT1G55740 56.960 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01203 K06617 - gmx:100807861 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01203 6 11110992 11115092 Arst6g01203 6 11110992 11115092 ECH
Arst6g01203 6 11110992 11115092 Arst6g01203 6 11110992 11115092 PCT