Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01156 ATGTCTGATGCGTTTTGCTCCGACTGCAAGCGGCAGACGGAGGTGGTTTTCGACCACTCCGCCGGCGACACCGTCTGCTCCGAGTGCGGTCTCGTTCTCGAGTCCCACTCCATTGACGAGACCTCGGAGTGGAGGACCTTTGCTAACGAGTCCGGGGATAACGATCCGGTTCGTGTCGGCGGGCCCACTAACCCGCTCCTTGCCGACGGTGGCCTTAGCACTGTCATCGCCAAGCCCAACGGCGCCAGCGGCGAGTTGTTCTCGTCTTCCCTTGGCCGCTGGCAGAACCGTGGCTCTAATCCTGATCGCGGTCTCATCCTCGCTTTCAAGACAATCGCCACTATGTCCGATAGGTTGGGACTCGTCGCAACCATCAAGGATCGAGCTAATGAGATATACAAGCGGGTTGAAGATCAGAAGTCTAGTAGAGGAAGAAATCAGGATGCATTATTGGCTGCTTGCCTCTACATTGCTTGTAGACAGGAGGACAAGCCACGCACTGTAAAGGGTACCACCTATGATTTTTTTAACATCTGGATGCTAAAAGAATACATAGTGAAACAACTGGGTTTGGAGAAAGGTCAATCTGTGGAGATGGGAACAATACATGCTGGTGACTTTATGAGGCGATTTTGTTCTAATCTTGGTATGAATAATCAAGCTGTCAAAGCTGCTCAAGAAGCTGTTCAGAGATCAGAAGAGTTTGATATACGGCGGAGTCCCATATCAATTGCTGCAGCAGTGATATACATCATAACTCAGCTGTCAGATGATAAAAAAGCTCTCAAAGAAATATCATTAGCCACAGGAGTTGCAGAAGGAACCATTAGGAACTCGTACAAGGATCTTTATCCTCATGTTTCAAAAATAATACCAAACTGGTATGCAAAGGAGGAAGATTTGAAGAACCTTTGCAGCCCTTGA 924 0.4859 MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNPLLADGGLSTVIAKPNGASGELFSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGTTYDFFNIWMLKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQRSEEFDIRRSPISIAAAVIYIITQLSDDKKALKEISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01156 307 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
Arst6g01156 307 Gene3D - 5 178 - -
Arst6g01156 307 CDD CYCLIN_TFIIB_rpt1 108 169 - -
Arst6g01156 307 ProSitePatterns Transcription factor TFIIB repeat signature. 144 159 IPR023486 -
Arst6g01156 307 Gene3D - 203 306 - -
Arst6g01156 307 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 4 304 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 FunFam Transcription initiation factor IIB 203 306 - -
Arst6g01156 307 Pfam Transcription factor TFIIB repeat 199 285 IPR013150 GO:0017025
Arst6g01156 307 Pfam Transcription factor TFIIB repeat 103 169 IPR013150 GO:0017025
Arst6g01156 307 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Arst6g01156 307 SUPERFAMILY Cyclin-like 105 170 IPR036915 -
Arst6g01156 307 SUPERFAMILY Cyclin-like 202 303 IPR036915 -
Arst6g01156 307 FunFam Transcription initiation factor IIB 5 188 - -
Arst6g01156 307 SMART cyclin_7 206 285 IPR013763 -
Arst6g01156 307 SMART cyclin_7 110 190 IPR013763 -
Arst6g01156 307 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 152 171 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 207 225 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 55 76 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 239 255 IPR000812 GO:0006352|GO:0070897
Arst6g01156 307 PRINTS Transcription initiation factor IIB signature 271 285 IPR000812 GO:0006352|GO:0070897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01156 K03124 - fve:101305780 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01156 6 10632763 10636855 Arst6g01156 6 10632763 10636855 ECH
Arst6g01156 6 10632763 10636855 Arst6g01156 6 10632763 10636855 PCT