Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01148 ATGGTTGGGAGTATAATGGGGAGGTTTAGAAATAGCAATGGTACATTAGCGTATGAAAATGGATCTGTTCAGAATGGTGGATGCTTATCAGAGGAGAAGCTTGATGAACTTAGGAAGTTGATTGGAAAATCAGAGGGTGATCCTCTGAGAATTGTTAGTGTAGGAGCAGGTGCATGGGGGAGTGTGTTTGCAGCATTGCTTCAAGACAGTTATGGGCAATTCAGGGACAAGATACAGATTAGGATATGGAGGAGGGCAGGCAGGGCAGTGGACAGGGCGACGGCCGAGCACCTCTTCGAGGTCATTAACTCGAGGGAAGACGTCCTGCGCCGGCTGATCCGGCGATGCGCTTACCTTAAATATGTGGAGGGGAGGCTAGGGGATAGGACATTGTTTGCTGATGAGATTCTGAAGGATGGTTTTTGCTTGAACATGGTTGACACACCCCTTTGTCCCTTGAAAGTTGTTACTAATTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGATTGCCTTCAACTGAGACAAGGGAGATTTTTGAAGAGATTAGTGAGTATTGGAAGGAGAGGATCACAGTTCCTATTATAATCTCTTTGGCTAAGGGTATTCAAGCTGCATTGGACCCTGTTCCTCATATTATTACTCCTACTAAGATGATTCACCAAGCAACTGGAGTTTCTATGGAGAACATACTCTATCTTGGGGGTCCAAATATTGCATCAGAAATATACAACAAGGAGTATGCCAATGCAAGAATTTGTGGTGCTGAGAAATGGAGGAAGCCTCTTGCAAAGTTTCTAAGACAACCCCATTTTATTGTGTGGGACAACAGTGACCTTGTCACTCATGAAGTCATGGGAGGCTTGAAAAATGTCTATGCAATTGGAGCTGGTATGGTAGCAGCACTAACCAATGAGAGTGCAACAAGCAAATCTGTATACTTTGCACACTGCACATCAGAGATGATCTTCATTACTCACTTGTTGGCTGAAGAGCCTGAAAAGCTTGCAGGACCATTGTTGGCTGATACATATGTGACTCTCTTAAAAGGGCGTAATGCATGGTATGGTCAAATGTTAGCAAAAGGTCAACTAAGCCCTGACATGGGTGACAGCATTAGTGGCAAAGGAATGATACAGGGAGTGTCTGCAGTGGAAGCATTCTTTGAGCTTCTGAGCCAATCAAGCTTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTTTGCCCTATCTTGAAGACACTCTACAAAATATTGATATCGAGAGAACTATCATCACAAGCAATTCTGAAAGCTCTGAGGGATGAAAATCTGAATGATCCCAGGGAACGCATTGAGATTGCACAGAGCCATGTTTTCTACAGGCCTTCACTTCTTGGACAGCCATGA 1410 0.4411 MVGSIMGRFRNSNGTLAYENGSVQNGGCLSEEKLDELRKLIGKSEGDPLRIVSVGAGAWGSVFAALLQDSYGQFRDKIQIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEGRLGDRTLFADEILKDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISEYWKERITVPIIISLAKGIQAALDPVPHIITPTKMIHQATGVSMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISRELSSQAILKALRDENLNDPRERIEIAQSHVFYRPSLLGQP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01148 469 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 143 277 - -
Arst6g01148 469 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 281 430 IPR006109 GO:0005975|GO:0047952
Arst6g01148 469 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 281 430 IPR008927 -
Arst6g01148 469 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 153 255 IPR011128 GO:0016616|GO:0046168|GO:0051287
Arst6g01148 469 Gene3D - 31 112 - -
Arst6g01148 469 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 31 112 - -
Arst6g01148 469 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 47 443 - -
Arst6g01148 469 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 281 441 - -
Arst6g01148 469 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 274 298 IPR006168 GO:0006072|GO:0009331|GO:0047952
Arst6g01148 469 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 53 70 IPR006168 GO:0006072|GO:0009331|GO:0047952
Arst6g01148 469 Gene3D - 147 277 - -
Arst6g01148 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 281 IPR036291 -
Arst6g01148 469 Gene3D - 281 441 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01148 Arst-Chr6 10541833 10544506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01148 1 469 Acyl Lipid Metabolism Gene Families AT2G41540 86.780 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01148 K00006 - gmx:100810871 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01148 6 10541833 10544506 Arst6g01148 6 10541833 10544506 ECH
Arst6g01148 6 10541833 10544506 Arst6g01148 6 10541833 10544506 PCT