Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01138 ATGGCATTTCTAACTCGCCTCCATTCCTTCGCAAGGCCCTTCTCCTCTCTCCTCTCCACCTCGCGCCAGAGTGGAGGTAGAGCAATAATGACCAAGATTGGCATGAACATGTGCTCGCTTTCTCCAGCTGTTTCAACTGAAGCCTCAGATTTAGAATTTGAAGTGATCCATGATGATGTCAAAGCAACAGAAAAAGATGATGCACTTCGCTTGGCTGTCTCACAGCTTGCTAATGAGTTTAGTGAGGAATCCATGTTATCTTTGCAGAAGTTTTTCGGTGTGCGCCGCGCTCAAGTGATATCTACGGGCTCCTTGAAGCTTGACATAGCTCTTGGAATGGGAGGATTGCCAAAGGGTAGGATTGTTGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTATTAAAGAAGCTCAAAAGCATGGAGGATATTGTGCATATCTTGATGTAGAGAATGCATTGGACGCTTCACTTGTGGAATCAATAGGTGTGAATACCGAAAAACTTCTTGTCTCGCATCCAGATTGTGCTGAAAATGTGTTGAGCATGGTTGATACATTAACGAAAAGTGGAGCTGTAGATGTGATTGTGATTGATAGTGTTGCTGCCCTTCTACCCAAGCGTGAACTTGATCAGTTAGGTGTTAGCACCAAACTAGATTTACAACCCCGACTGATGACCCAAGCACTGCGGAAAATTCAGTATTCATTATCACATTCACAAACTCTTATCATTTTTGTTAATCAGATTAGATTTAGTCCAAAATCAGCTAAGGGATGTGGACCTGCAGAAGAGGTCACTTGTGGTGGAAATGCTTTGAGATTCTATGCTGCTGTTCGATTGAGACTTTCGAGAATGGGATTGATCAAAACTGATGATAAGGTGGAGGGTCTTCGGGTCTGTGTGCAAGTGGCGAAAAATAAGCTAGCACCAGCAGCACTCAAAAAGGCTGAACTAGGCATCAAGTTTGGAGGAGGCTTTTGCCAAGAAGCAGAGGTCTTAGATTTGGCTTGTGAACATGGAATGATTGTAAAAGACGAGGAAAGCTACCTTATAGAAGGAAATACTTTCGATACTAGAAAAGCGGCCGAAGTGTATTTGGCAGAGGATGACAGCGTCTTTGACAAGTTGGTAATGGACTTGAGAAGGCTATATTTTTGA 1176 0.432 MAFLTRLHSFARPFSSLLSTSRQSGGRAIMTKIGMNMCSLSPAVSTEASDLEFEVIHDDVKATEKDDALRLAVSQLANEFSEESMLSLQKFFGVRRAQVISTGSLKLDIALGMGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKHGGYCAYLDVENALDASLVESIGVNTEKLLVSHPDCAENVLSMVDTLTKSGAVDVIVIDSVAALLPKRELDQLGVSTKLDLQPRLMTQALRKIQYSLSHSQTLIIFVNQIRFSPKSAKGCGPAEEVTCGGNALRFYAAVRLRLSRMGLIKTDDKVEGLRVCVQVAKNKLAPAALKKAELGIKFGGGFCQEAEVLDLACEHGMIVKDEESYLIEGNTFDTRKAAEVYLAEDDSVFDKLVMDLRRLYF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01138 391 Gene3D - 95 387 IPR027417 -
Arst6g01138 391 ProSiteProfiles RecA family profile 2. 266 337 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Arst6g01138 391 Pfam recA bacterial DNA recombination protein 68 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 ProSitePatterns recA signature. 277 285 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Arst6g01138 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 319 IPR027417 -
Arst6g01138 391 PRINTS RecA protein signature 226 255 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 PRINTS RecA protein signature 274 302 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 PRINTS RecA protein signature 154 183 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 PRINTS RecA protein signature 188 217 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 PRINTS RecA protein signature 308 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 ProSiteProfiles RecA family profile 1. 96 255 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Arst6g01138 391 CDD RecA 98 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 PANTHER RECA 54 389 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst6g01138 391 SMART AAA_5 118 292 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01138 Arst-Chr6 10384522 10388138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01138 - - aip:107645515 719.924