Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01090 ATGGATGGGACCACATCATCTTTGGTGAATGATGCAGTGGATTGTTTTGCTGAAGAGGAAATTTTGGAGCCTAATATCTCAACATTGGTTATGAATTTCGAGAATAAGTCTGATCCTTTTGGAGCAGTCAGTAATCCGCTCTATCAGACTGCTACTTTTAAGCAGCCTAATGCAATAGAAAATGGTCCCTATGATTATACCAGAAGTGGAAATCCCACTCGAGATGCTTTAGAAAGTTTGTTGGCGAAACTTGATAAGGCGGATAGAGCCCTATGCTTCACCAGTGGAATGGCTGCTCTGAGTGCTGTTTCTCATCTTGTTCAAGCTGGTGAGGAAATTGTTGCTGGAGATGATCTATATGGTGGAACAGACAGGTTGCTGTCCCGAGTAACTCCAAAGCATGGCATTGTGGTCAAACGGGTAAATACAACTGATCTTAATGAGGTTGCATCTGCTATTGGACCCCGGACTAAGCTTGTGTGGCTTGAGAGCCCAACCAATCCTCGAATACAAATTACTGATATTCGAAAAATATCTGAGATGGCTCATGCACATGGTGCTCTGGTGTTGGTGGATAATAGTATAATGTCACCTGTGTTGTCTCGGCCATTAGAACTTGGAGCAGATATTGTTATGCACTCAGCTACCAAATTTATTTCTGGACATAGCGATATTATGGCTGGTGTGCTTGCTGTGAAAGATGAAAGGTTGGGAAAAGAGTTATATTTCTTGCAAAATGCAGAGGGTTCAGGCTTGGCTCCATTTGACTGTTGGCTCTGTATGCGAGGAATCAAGACGATGTCCCTGCGAGTTGAGAAACAACAGGATAATGCTCAGAAGATTGCCGAGTTCCTTGCCTCCCATCCTCTAGTGAAGAAAGTAAACTATGCTGGTCTGCCTGATCATCCTGGACACGATTTACACTACTCGCAGGCAAAAGGTGCAGGATCTGTGCTTAGCTTTTTAACAGGTTCCCTGGCACTCTCAAAGCATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTCGGAAGTGTGAAGTCCCTCATCAGTTTGCCGTGTTTCATGTCGCACGCAAGCATACCATCGGCGGTTCGTGTGGAAAGAGGCTTAACCGAAGATCTAGTGCGCATATCTGTGGGGATTGAGGATGTGAATGATCTCATTTCTGATCTAGACAATGCCCTTAGAACTGGCCCTGTGTAA 1212 0.4422 MDGTTSSLVNDAVDCFAEEEILEPNISTLVMNFENKSDPFGAVSNPLYQTATFKQPNAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALSAVSHLVQAGEEIVAGDDLYGGTDRLLSRVTPKHGIVVKRVNTTDLNEVASAIGPRTKLVWLESPTNPRIQITDIRKISEMAHAHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFISGHSDIMAGVLAVKDERLGKELYFLQNAEGSGLAPFDCWLCMRGIKTMSLRVEKQQDNAQKIAEFLASHPLVKKVNYAGLPDHPGHDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISLPCFMSHASIPSAVRVERGLTEDLVRISVGIEDVNDLISDLDNALRTGPV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01090 403 FunFam Cystathionine gamma-synthase homolog 24 266 - -
Arst6g01090 403 NCBIfam cystathionine beta-lyase 27 400 IPR006238 GO:0004121|GO:0071266
Arst6g01090 403 Gene3D - 25 266 IPR015421 GO:0003824
Arst6g01090 403 FunFam Cystathionine beta-lyase 267 400 - -
Arst6g01090 403 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 26 399 IPR000277 GO:0019346|GO:0030170
Arst6g01090 403 Gene3D Aspartate Aminotransferase, domain 1 267 400 IPR015422 GO:0003824
Arst6g01090 403 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 209 223 IPR000277 GO:0019346|GO:0030170
Arst6g01090 403 Pfam Cys/Met metabolism PLP-dependent enzyme 28 398 IPR000277 GO:0019346|GO:0030170
Arst6g01090 403 SUPERFAMILY PLP-dependent transferases 34 399 IPR015424 -
Arst6g01090 403 CDD CGS_like 41 399 IPR000277 GO:0019346|GO:0030170
Arst6g01090 403 PIRSF CGS 18 401 IPR000277 GO:0019346|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01090 Arst-Chr6 9871185 9875142 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01090 K01760 - gmx:100812354 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01090 6 9871185 9875142 Arst6g01090 6 9871185 9875142 ECH