Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01085 ATGGCGGAAGCGATGATGGTGGAGAACGGCAACGGCAACGGCAACGGCAAGGAGGACTACGGTGAGTGCTTGATCGGATACTTCGAGGAAGGTAGCCATGAGTCCCACAGGTACTACCTCTCCCGAAGAACCACCCTAGAGATGCTCAAGGACAGAGGCTACTCCATCCCTGCTTCTGAAATCGACCTCTCTCTCTCCCAATTCAGAGCCATTCACGGTGATTCCCCTGACGTCGACCGCCTCCGCTTCTCCGCCACTCACCTCTCTGATCCTTCCAAGAGGATTTTAGTTATCTTCTGTGGCCAACACATTGTGAAAGTTACTTCCATCCGCAGCATTGCAGCGCAGATTGTCAATAGAGAAACTTTAACTGGCCTCATTTTGATTGTTCAAAGTACTATTACTAGCCAGGCCTTGAAAGCTGTCAATCTTTTCTCATTCAAAGTTGAAATCTTTCAGATCACAGACTTGCTTATTAATATTACAAAGCATGTATTGAAGCCAAAGCATGAAATTCTAACTGACAAACAGAAAAAGAACCTCCTAAAGAAGTACAATTTAGAAGAAAAGCAGCTACCCCGCATTCTACAAACAGATGCAATTGCAAGATACTATGGACTAGAGAAAGGGCAAGTAGTTAAGATAACTTACAGTGGTGATATCACTCAGATGCATGTCGCCTATCGATGCGTTTGGTGA 699 0.4521 MAEAMMVENGNGNGNGKEDYGECLIGYFEEGSHESHRYYLSRRTTLEMLKDRGYSIPASEIDLSLSQFRAIHGDSPDVDRLRFSATHLSDPSKRILVIFCGQHIVKVTSIRSIAAQIVNRETLTGLILIVQSTITSQALKAVNLFSFKVEIFQITDLLINITKHVLKPKHEILTDKQKKNLLKKYNLEEKQLPRILQTDAIARYYGLEKGQVVKITYSGDITQMHVAYRCVW 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01085 232 SUPERFAMILY RPB5-like RNA polymerase subunit 157 232 IPR035913 -
Arst6g01085 232 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 33 160 IPR036710 GO:0003677|GO:0003899|GO:0006351
Arst6g01085 232 PIRSF RPB5 27 232 IPR014381 GO:0003899
Arst6g01085 232 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 32 232 IPR014381 GO:0003899
Arst6g01085 232 Pfam RNA polymerase Rpb5, C-terminal domain 159 231 IPR000783 GO:0003677|GO:0003899|GO:0006351
Arst6g01085 232 Gene3D - 157 232 IPR035913 -
Arst6g01085 232 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 157 232 - -
Arst6g01085 232 Gene3D - 29 156 IPR036710 GO:0003677|GO:0003899|GO:0006351
Arst6g01085 232 Pfam RNA polymerase Rpb5, N-terminal domain 33 116 IPR005571 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01085 Arst-Chr6 9829821 9831187 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01085 K03013 - qsa:O6P43_010076 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01085 6 9829821 9831187 Arst6g01085 6 9829821 9831187 ECH