Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01080 ATGGATACTTTGCTCAAAACACCTAACAAGCTTGAATTCTTGCACCCACTACACGGTTATTCTGAAAAGCTCGGAACTTTAGCCCCTTCTAAGTTGCAATTTGGATTTGGTTCTAAGAAGCAGCCACTTGTGAAGTGGGGTAAGTGCGGTGGTGGTGGTGGTGGTTTGAGGGCTAGTAGCAGTGCCCTTCTTGAACTTGTTCCTGAGATCAAGAAAGAGAATCTTGATTTTGAGCTTCCCTTGTATGATTCCTCAAAGGGTGCTGTGGTGGACCTTGCTGTTGTGGGAGGAGGACCGGCAGGGCTCGCCGTGGCGCAGCAGGTTTCTGAGGCAGGGCTCTCTGTTTGTGCCATTGACCCTAACCCTAGGTTGATTTGGCCCAACAATTACGGCGTTTGGGTCGATGAATTCGAGGCCATGGACTTGCTTGATTGCCTTGACACCACTTGGTCTGGTGCTGTTGTCTACATTGATGACAACAAGAAGAAGGATCTTGATAGGCCTTATGGCAGGGTCAATAGGAAGCAATTGAAGTCAAAGATGATGCAGAAATGCATATCAAATGGTGTTAAGTTCCACCAAGCTAAAGTCATCAAGGTTATTCATGAGGATGCCAAATCTTTGTTGATTTGTAATGATGGTGTCACGGTTCAGGCTACCGTGGTTCTTGATGCAACTGGCTTTTCCAGATGCCTTGTTCAGTATGATAAACCTTATAATCCCGGTTACCAGGTTGCTTATGGAATCTTGGCTGAGGTTGATGAACATCCATTTGATGTGGATAAAATGCTTTTCATGGATTGGAGAGATTCCCATCTGGATGGGGACATGGTGCTGAAGGAAAGGAATAGCAGAATTCCCACCTTCCTATATGCCATGCCCTTTTCATCCAATCGGATATTTCTTGAAGAAACCTCTCTTGTTGCGCGGCCAGGGTTACGTATGGATGATATACAGGAAAGAATGGTTGCAAGGTTGAAACACTTGGGAATTAGAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCCATGGGTGGTCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGAATCGGCGGGACTGCAGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACTCTCGCCGCAGCTCCCATTGTTGCTAATGCCATTGTGCAAAGTCTTGGTTCCGACAGAGGTCTTTTGGGAGCCGATATATCCTCCCGAGTGTGGAAAGATTTATGGCCGATCCAGAGGCGGCGGCAGAGGGAGTTCTTCTGCTTTGGTATGGACATCTTGCTCAAGCTTGATTTACCAGGAACAAGGAGATTTTTCGATGCATTTTTCGATCTAGAACCTCGTTACTGGCATGGATTCTTGTCATCGAGATTGTTTCTCCCTGAACTCTTTTTTTTTGGGCTCTCTCTATTTTCCTATGCTTCCAATACATCTAGATTAGAGATTATGGCAAAGGGGACTCTTCCTTTGGCAAACATGATCAACAACTTGTTAAAAGATACAGAATAA 1521 0.4583 MDTLLKTPNKLEFLHPLHGYSEKLGTLAPSKLQFGFGSKKQPLVKWGKCGGGGGGLRASSSALLELVPEIKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDNKKKDLDRPYGRVNRKQLKSKMMQKCISNGVKFHQAKVIKVIHEDAKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDGDMVLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLLGADISSRVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELFFFGLSLFSYASNTSRLEIMAKGTLPLANMINNLLKDTE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01080 506 Gene3D - 88 430 IPR036188 -
Arst6g01080 506 FunFam lycopene epsilon cyclase, chloroplastic 87 425 - -
Arst6g01080 506 NCBIfam lycopene cyclase family protein 91 486 IPR010108 GO:0016117|GO:0016705
Arst6g01080 506 SUPERFAMILY FAD/NAD(P)-binding domain 90 473 IPR036188 -
Arst6g01080 506 PANTHER - 61 501 - -
Arst6g01080 506 Pfam Lycopene cyclase protein 91 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01080 Arst-Chr6 9817212 9819143 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01080 K06443 - gmx:100783830 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01080 6 9817212 9819143 Arst6g01080 6 9817212 9819143 ECH