Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01058 ATGTGGGCTCTTCGTCGAGCTTCTCTTCCTCTCAGGAATCGAGGATTTAATGTGAGAGCTTCTTGCATCAAATCAGTTTCGGGTACTTGGGTGGAAGATGATTCTAGGACGTTGGACTCATCTAGAATGGCATATGGTCATTTTTTGTTGCCGAATATGTTCTACCATTCTGGGTATGCCTCACTGAAATTCACCGTGAGTAGGCGCGAACTTTCTTCGCAAGCTGATGCCAGTAGCACGAAAGATCAGGATGATTTGGAGGATGGGTTTTCCGAGCTTGAGACACCAGCTGCTGAATCTGAATATGGTAAAGACGAATTCAATGATATTAAAGATGGTGAGGAGCCACGCGAGGAGTTGGAGTTTTCAGACACTGAGGTTGAACCAAGTGAGAAAAAAGGACGTCGACGAGCTCAGTCAGAAATTTTCAAATTGATTGATAATTCTCCAACTACTTCTGTTCAAGTGCTTATGGATAAGTGGGTTGAAGAAGGGAAAGAACTAAGCAGACAAGATATCTCACTAGCCATGGTTAATCTTCGGAGGCGCAAACTGTATTTTAAAGCTTTTCAGCTCTCAGAGTGGGTTGTATCAAAAAGTCAGCTTGAGGTTACTGAGAAAGATCATGCTACCCGTGTTGATTTGATTGCTAAATTGCGTGGGTTACATGAAGCAGAGATGTACATTGAGCGTATTCCAGAGTCTTTTAAAGGAGAGACAGTATATCAAACCCTTTTAGCAAGTTGTGTTGCTCAGAACAATTTGAAGAAAGCAGAGGAAACTTTCAACAAAATGAAGGATTTGAAATTCCCTCTTACATCATATGTTTGGAATCAGTTGCTTCTTCTGTATAAGAGGCATGACAAGAAGAAAATAGCCGATGTATTGTTAATGATGGAAAATGAGAACGTCAAACCTTCTCCTTTTACTTATAAAATATTAATAGACGCAAAAGGCCAGTCCAAAGATATTGATGGCATGGATCTAATTGTTGAGAAAATGAAGGCTCAAGGGATTGAACCAGACATCCGAACAAAAGCAGTTTTGGTTGGACACTACAAAACTGCTGGGCTTGAAAAAAAAGCCGAAGATATGTTGAAGGAAATGGAAGGTGAAAATTTGAAAGAGAATTCTTGGCTTGGTCGATATTTGCTTCCTCTATACGCAAATCTGGGTAAGGCTGATGAAGTGGGAAGAATTTGGGAGGTCTGTCAGGCTTCCCCTCGAATTGAAGATTGTCTTGCTGCGATTGAAGCTTTTGGAAAGTTGAAGAAAATTGATGAAGCAGAGGCTGTTTTCGAAATGATATCAAAGAGGTGGAAGCTTTCTTCCAAGAACTACTCAGTCATGCTGAAGGTTTATGCAAATAATAAGATGCTAGCAAAGGGCAAAGATCTCATTAAGCGAATGGCAGAGAGCGGGTGTCAAATAGGCCCATTGACATTGGACGACCTAGTGAAACTTCACATCCAAGCAGGGGAAGTGGAGAAGGCAGACACTATTCTGCAAAAGGCTATCATGCAAAACCAGTTGAAACCATTAATCATTTCTTATATTGCTATTATGGAGCAGTATGCTAAGAGGGGTGACGTCCATAATTCAGAAAAGATTTTGCACAAAATGAAACAAGCTGGCTACACGATTCGTCTGAGGCAATACCAAATTCTCCTACAGGCCTATATGAATGCCAAGCTTCCGGCCTATCGGATTAGGGACAGCATGAAGGCTGATAACGTATTTCCCAACAGAGATTTTGCAAATCTGTTGGCTCAAGTTGATGGTTTTAGGAAGAATCCAGCTTCGGATTTGCTTGATTGA 1818 0.4114 MWALRRASLPLRNRGFNVRASCIKSVSGTWVEDDSRTLDSSRMAYGHFLLPNMFYHSGYASLKFTVSRRELSSQADASSTKDQDDLEDGFSELETPAAESEYGKDEFNDIKDGEEPREELEFSDTEVEPSEKKGRRRAQSEIFKLIDNSPTTSVQVLMDKWVEEGKELSRQDISLAMVNLRRRKLYFKAFQLSEWVVSKSQLEVTEKDHATRVDLIAKLRGLHEAEMYIERIPESFKGETVYQTLLASCVAQNNLKKAEETFNKMKDLKFPLTSYVWNQLLLLYKRHDKKKIADVLLMMENENVKPSPFTYKILIDAKGQSKDIDGMDLIVEKMKAQGIEPDIRTKAVLVGHYKTAGLEKKAEDMLKEMEGENLKENSWLGRYLLPLYANLGKADEVGRIWEVCQASPRIEDCLAAIEAFGKLKKIDEAEAVFEMISKRWKLSSKNYSVMLKVYANNKMLAKGKDLIKRMAESGCQIGPLTLDDLVKLHIQAGEVEKADTILQKAIMQNQLKPLIISYIAIMEQYAKRGDVHNSEKILHKMKQAGYTIRLRQYQILLQAYMNAKLPAYRIRDSMKADNVFPNRDFANLLAQVDGFRKNPASDLLD 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01058 605 PANTHER OS12G0527900 PROTEIN 71 585 - -
Arst6g01058 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 443 477 IPR002885 -
Arst6g01058 605 NCBIfam pentatricopeptide repeat 241 272 IPR002885 -
Arst6g01058 605 NCBIfam pentatricopeptide repeat 309 343 IPR002885 -
Arst6g01058 605 NCBIfam pentatricopeptide repeat 447 476 IPR002885 -
Arst6g01058 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
Arst6g01058 605 Pfam Pentatricopeptide repeat domain 508 560 IPR002885 -
Arst6g01058 605 Gene3D Tetratricopeptide repeat domain 415 599 IPR011990 GO:0005515
Arst6g01058 605 Gene3D Tetratricopeptide repeat domain 238 412 IPR011990 GO:0005515
Arst6g01058 605 Pfam PPR repeat 417 438 IPR002885 -
Arst6g01058 605 Pfam PPR repeat 447 475 IPR002885 -
Arst6g01058 605 MobiDBLite consensus disorder prediction 98 118 - -
Arst6g01058 605 MobiDBLite consensus disorder prediction 94 135 - -
Arst6g01058 605 Pfam Pentacotripeptide-repeat region of PRORP 238 400 IPR033443 -
Arst6g01058 605 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 413 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01058 Arst-Chr6 9559181 9562538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01058 150 545 EF-hand Containing Proteins AT1G02150 24.634 1.07e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01058 - - tpra:123891250 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01058 6 9559181 9562538 Arst6g01058 6 9559181 9562538 ECH