Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01040 ATGAAATTCGGGTGCTTGTTCACGGAGTATCTGCAGGAAGAGAGGGAGTTGTTGGATGAGAAATGCGCGCACATTGAATATGTGAGGTTGAAGAAAGTTCTCAAGAGCTGCCAGACCTGCAAACCATTGCACTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCCCTTGTTTCTGATCTTCCTAGCCACCAATTGTGCCAATGTCAATCCTGCCCAGTGTGTGATCAGAAGTTCTTCTCAGAGCTGATGAAGGAAGCATCAGACATAGTAGGGTTCTTCGGTTCAAGGGTTAAGCATCTTCTTGATCTTCATGTTGCGTCTGGAATGCAGAGATATGTATTGCGCCTGCGACAGTGCTTTAAAAATGATAGTGGACGAGATTGTTGTGAACTCAATGGAGTGTATGGTCACTTTAAGTGTGATCTAAATGTTAGTGACGCTGTAATGACGCTGATTCTTCCAGATTCTATCAAGCTCGAGTATAATCTAACTTGCGCAATATGTCTGGATTTAGTTTTCAACCCCTATGCTTTGGGTTGTGGTCATATCTTCTGCAAGTCATGTGCCTGTTCAGCTGCCTCTGTGATGATGTTCCAAGGCTTTAAAGCTGCAAGTCCTGAGTCTAAGTGTCCCATATGCAGAGAGGATGGAGTTTATTCTAAGAGTGTACGCATGTTAGAACTTGGTCTACTAATGAAAAGAAGGTACAATGATTACTGGAAAAAGAGGCTACTTAGCGAACGAAACAACATGGTGAAGCAATCCAAAGAATACTGGAATATGCAGTCTGCATATGCACTTGGATTACACTAG 819 0.4286 MKFGCLFTEYLQEERELLDEKCAHIEYVRLKKVLKSCQTCKPLHSSSSSSSPSPSPSLVSDLPSHQLCQCQSCPVCDQKFFSELMKEASDIVGFFGSRVKHLLDLHVASGMQRYVLRLRQCFKNDSGRDCCELNGVYGHFKCDLNVSDAVMTLILPDSIKLEYNLTCAICLDLVFNPYALGCGHIFCKSCACSAASVMMFQGFKAASPESKCPICREDGVYSKSVRMLELGLLMKRRYNDYWKKRLLSERNNMVKQSKEYWNMQSAYALGLH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01040 272 ProSiteProfiles Zinc finger RING-type profile. 167 216 IPR001841 -
Arst6g01040 272 SMART ring_2 167 215 IPR001841 -
Arst6g01040 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 268 IPR013083 -
Arst6g01040 272 CDD RING-HC_BAH1-like 157 230 - -
Arst6g01040 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 132 270 IPR033326 -
Arst6g01040 272 SUPERFAMILY RING/U-box 159 218 - -
Arst6g01040 272 Pfam RING-type zinc-finger 167 213 IPR027370 -
Arst6g01040 272 ProSitePatterns Zinc finger RING-type signature. 182 191 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01040 Arst-Chr6 9390717 9394061 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01040 K16275 - gmx:100781704 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01040 6 9390717 9394061 Arst6g01040 6 9390717 9394061 ECH