Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01030 ATGAGTATTAGTTTTGAGACATTCACGTGGAAAATCCAAAACTTCTCTAAACAGAACATCAAGAATCTACAATCCAAGGCTTTCCGTATAGGACATCATAAATGGAGGATCCGTTTGTATCCATTAAGGAGGGACGTTAACCATTTCTCGTTGTATTTGATGGTTGCGGATTCTCTACCGGCTTATGGTTGGAGCAGAAACACATATTTCAAGTTGATTCTTACAAATCAGGTTGATGCCAACAAGTCAATTGTAAAGGAGACTCAGCAGAAGTTCAATGGAGGATATCGCAGTTGGGGCTCAACATTCCTTACCCTCAGTGACTTCTATGATCCTAACCAAGGGTATCTAGTCAATAACACATGTATCATTGAAGCTCATGTTTGTGTTTCTGATGTTCCGCCTCATGCTATCAAATTAAGAAAAACCAGCAGTAGCATTAGTCCAGCAAGTGACTCTATCTCTATCTTGCTTGATGATCAAGAAACAGAATCAACAGATGGGAGCGAGACACTTACTTCCGCGACCTGCAGGTCTAGTCGAACTGAAGATGAAGATGAATTTTCAGACTTAACACTAAAGGACATCATAAATTTGGACAGTTTTGGTAAAGAAGAAGCATCTTTTGTTCCATTGGTGGAAGATGCCTGCATGTGGCATCCTGATCTAATACAGAGCCAGAGGAACCGAAGCGAACGATTCAAAATATGGGCATTCACATCTTTAGGCCAAGTTCTGCATTTCCTCAAGACAAGCAAGGTGAAGGACATGGATGAAGATGGTTGTAATTATCTGAAAGATTTATGGGAGGAGCTTGTTAGGTCCTCAGGATTCAACTTAACTTGGTTGGAGCCTTATGTTCAATCTGCACTGGGAATGAAGTCTCATTTGGAAAGAGCAGCGGGTATGGATGATTTAAGTGACAATTTGGTTGCCATTGAGATCAAGATGAAGAATCTGAGGGGAGAACTTGCTGCTGCAGAAGCTGAGTTTGTGGAAGCAAGGAAAGCTTTGGCTGAGGCAAGAAAAGGTTACAAAGAGATAGATATGAATGATGTGTTAGGCTATTCCATGTTTTAG 1080 0.4093 MSISFETFTWKIQNFSKQNIKNLQSKAFRIGHHKWRIRLYPLRRDVNHFSLYLMVADSLPAYGWSRNTYFKLILTNQVDANKSIVKETQQKFNGGYRSWGSTFLTLSDFYDPNQGYLVNNTCIIEAHVCVSDVPPHAIKLRKTSSSISPASDSISILLDDQETESTDGSETLTSATCRSSRTEDEDEFSDLTLKDIINLDSFGKEEASFVPLVEDACMWHPDLIQSQRNRSERFKIWAFTSLGQVLHFLKTSKVKDMDEDGCNYLKDLWEELVRSSGFNLTWLEPYVQSALGMKSHLERAAGMDDLSDNLVAIEIKMKNLRGELAAAEAEFVEARKALAEARKGYKEIDMNDVLGYSMF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01030 359 CDD MATH 7 128 IPR002083 GO:0005515
Arst6g01030 359 SUPERFAMILY TRAF domain-like 7 132 - -
Arst6g01030 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 341 - -
Arst6g01030 359 ProSiteProfiles MATH/TRAF domain profile. 5 128 IPR002083 GO:0005515
Arst6g01030 359 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 4 147 IPR008974 GO:0005515
Arst6g01030 359 SMART math_3 7 109 IPR002083 GO:0005515
Arst6g01030 359 Coils Coil 303 344 - -
Arst6g01030 359 MobiDBLite consensus disorder prediction 160 183 - -
Arst6g01030 359 Pfam MATH domain 12 129 IPR002083 GO:0005515
Arst6g01030 359 MobiDBLite consensus disorder prediction 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01030 Arst-Chr6 9359750 9362263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01030 - - ahf:112695908 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01030 6 9359750 9362263 Arst6g01030 6 9359750 9362263 ECH
Arst6g01030 6 9359750 9362263 Arst7g00878 7 6295541 6308007 ECH