Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01028 ATGCCACGACCCAGAAACATGCGTCCCAATATCGTTTCTGAGGCTGGGGTTTCTACTAGGTTGAATCAATATTGGGAAAGCATTCCGTTCCTCACTTCTGCTATTGTGGTTCTTTGTGGAATTATTTACTTGGTTTGTTTATTGGTTGGATATGATTCATTTGCTGAGGTATGCTTTTTGCCGTCTGCTGTTGTATCACGTTTTCAAGTTTACAGGATTTATACCTCCATTCTTTTTCATGGTTCGCTGCTTCATGTTCTCTTCAACATGATGGCCTTAGTTCCCATGGGATCTGAGATGGAGAGGGTCATGGGTTCAGTTCGCCTGCTATATGTCACGATTTTGTTGGCCACGAGCAATGCTATATTCCACATTCTCGTAGCACTGCTGGTGGCACACAATCCTATTCAATCGTCAGAATACTTCATGAATGAGTGTGCTATAGGCTTCTCGGGAGTTCTGTTTTCCATGATTGTTATTGAGACAAGCCTGAGTGGAGCTCAATCTCGGAGTGTTTTTGGCTTGTTTAACGTCCCGGCAAAATGGTATCCATTCCTTTTGCTAGTGGTGTTCCAGCTTCTCATGGAGAATGTCTCACTTCTTGGACACCTTTGTGGCATTATATCTGGGTTTGCATATACATATGGCTTGTTCAATATCCTAATACCTGGGACATCTTTTTATTCTTCCATTGAAGCTTCATCCTTGCTTTCATCGTGTGTGAGACGTCCTAAATTTATTGTTTGCACTGGTGGAAATACTTCGGGTTATATACCTACACATACAAGCCGAAATTCAACTTCTGGTGGAATACTTTCTGGAAATGTTTGGAGAAACCTATCATCATTGATGCCGCAAAGAGAAGTGTCTGCCGCACAGCCAACTGAGGACAGTAGGTTCCCTGGGAGGGGAAGGACCCTTGGTTCTGGTCAAGGTCAAGCAGCTTCTGCTCTAAATTCAGATTCAAGTCTTCAAGCTAGACTCTTGGATAATAGCAGCCCTGATCAACCTTTAGACTCATCTGCTCACAGCACTGCTCAACAGTTATCAGGAGGAAGGAATTCAGCTGGTAATGTAGCAACAGTGGCTGCTAATGTTCCACAGCATCAGGGTGCAACTGCTTCAGAAGAGGAGATTAAGAAACTGGTATCAATGGGCTTTGACAGGACACAGGTGGAGGTAGCACTGGCAGCTGCTGAAGGTGATCTTAATGTGGCAGTGGAAATACTAATGAGCCAGCAGGTCCTAATCTAA 1254 0.4394 MPRPRNMRPNIVSEAGVSTRLNQYWESIPFLTSAIVVLCGIIYLVCLLVGYDSFAEVCFLPSAVVSRFQVYRIYTSILFHGSLLHVLFNMMALVPMGSEMERVMGSVRLLYVTILLATSNAIFHILVALLVAHNPIQSSEYFMNECAIGFSGVLFSMIVIETSLSGAQSRSVFGLFNVPAKWYPFLLLVVFQLLMENVSLLGHLCGIISGFAYTYGLFNILIPGTSFYSSIEASSLLSSCVRRPKFIVCTGGNTSGYIPTHTSRNSTSGGILSGNVWRNLSSLMPQREVSAAQPTEDSRFPGRGRTLGSGQGQAASALNSDSSLQARLLDNSSPDQPLDSSAHSTAQQLSGGRNSAGNVATVAANVPQHQGATASEEEIKKLVSMGFDRTQVEVALAAAEGDLNVAVEILMSQQVLI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01028 417 MobiDBLite consensus disorder prediction 328 355 - -
Arst6g01028 417 MobiDBLite consensus disorder prediction 287 316 - -
Arst6g01028 417 SUPERFAMILY UBA-like 370 413 IPR009060 GO:0005515
Arst6g01028 417 FunFam RHOMBOID-like protein 13 24 219 - -
Arst6g01028 417 CDD UBA_At3g58460_like 376 411 - -
Arst6g01028 417 SMART uba_6 375 412 IPR015940 -
Arst6g01028 417 SUPERFAMILY Rhomboid-like 26 219 IPR035952 -
Arst6g01028 417 Pfam UBA/TS-N domain 376 410 IPR015940 -
Arst6g01028 417 PANTHER DER1-LIKE PROTEIN, DERLIN 21 309 - -
Arst6g01028 417 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 373 413 IPR015940 -
Arst6g01028 417 Gene3D - 22 219 IPR035952 -
Arst6g01028 417 Gene3D - 341 415 - -
Arst6g01028 417 Pfam Rhomboid family 66 219 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01028 Arst-Chr6 9354314 9358894 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01028 - - ahf:112695909 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01028 6 9354314 9358894 Arst6g01028 6 9354314 9358894 ECH