Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01023 ATGAATCCGCCCACGATAGACTTCAAGGTGGATCTCAATTCAGAGAGGGTTGAAGAAGAGAAAATGGAAGGGGGTTCTATGCTTTATTGTGATCTTTGTGATACAGAAGTAGTTTACAAGTTGGCGCAAATGTTGCTTCCAGGGCTAGCAACTTCCTGTGTTGATAGCACAGCTGGGAGCTTCAAGACTCCTGGTTCAGTGGCTGTTGATTTGAGAAAGGAAATGATAATCTATATTACGCAGAGAAGCGAAACGTTTGTCGCTGAGTCTATTGTCTTGGATGGTGGTCCTAATGGTGAAGAATCGGATCATCCTTTTGATATCATTTCTAACTTTGTTGATGACTTTGCTATTTCAAAGAGGAATTTATTTACCCGGGTTTCTGGATTGCTACTCACTGATATGAGAGAAGACAAGATTGATGATTTCATGCAGGAGATGGAACTGACTGGTTTTTGGCCACTGGAAAGAAGAGAAACGATTGCAGAGGCGATTCTAAAGAATGTTGACATCAAGAATGAATTTCATTGTGCTATGAAGTTCAGATCTGTAGATGATCTTGCTGTTCATGCTTTCCATTGTAACTTCAGACCTCTATTCTGCGAAAATGAGGGATGCAATGCAAGGTTAATTGCAAAACATTTGGAAAAGCATGACTCAATTTGTCCTTTCAAAATAATTCCATGTGAGCAGAAGTGTTCAGATAGCATTATGAGGCGTGCAATGGACAGACACTGTATCACTGTTTGTCCCATGAAGCTTGTAGATTGTCCATTTCATTCGTTAGGTTGTCGATCTGCTATAGCACAATGTGTGATCGAAAAGCACTGCGCAGATGATGTTCGTTCTCACTTGTGGCACTTGCTTAAAGGCATGTACAAGCAAGCATCTGGGGAAGATCTTCAAAGACGGGTACAGCAAATTGTACAGGCATCACCAGGCAGCAGGTTAGCAGAGGCCCGGGATGTGAGATCTCTAAACTTTGTTGTCAAGGATATTGAAGCTAAGCTAGGGCCTTTTGAGTTGGGTTCTGCGAAAAAAAATAGCACAGAGACTCTCACCAAAAACAATGGTGGGAAAAATGTTGCCACCAATGCAAACGGCAGTGAAGAAAGCTCAAAGACTCCAGATTTGATAAATTCATCACATCAAGCTGAAGTCAGTGCTGAGAAGAAAAATAGTGTAGAGACTATCGCTAATAACAACAATGGGGGAAATAGTGTTGCCAATGCAAAGGGCAGTGGAGAGAGCACAAAGGCTCCAGATATGGGAAATTCATCCAATAAAGCTGAACGGAGTTTTGAGAAGAAAAATATCGCAGAGACTGTTGCCGAATACGACGATGGGAGAAGTAGTGTTACCAATACAAATGGCAGTGAAGAGAGCACAAATGCTCTACATATGGTAAATTTATATACAACTGAAGTGAGTGCTGATAAAAAAGATAGCTTAGATATTACAACCAATGAGAAGGGCAGTGAAGAGAGCACAGAGGCTTTAGATATGGTAGATTTACTAGAAAAAGTTGAAGCGCGCGGTATCATCCATATGGATAGTTCAGAGAATACTGAGAACAAAGATGGCAAACATAGTCACATTGAAAGCAGGAAGAGCAACGAGAGGGAAACGATTCACATTGAAAGCAATGGCAGCGAAGAAAGAACACAGAGTTGCATTGAAAGCAAGAGCAACGAAGTTGATAAACAGAATCCAATTATGGCTAGTTTATCAAATGAAGATGAAACTAGCCTTATGAACATGGACGGTGTGCAGATGTACATCAAAACCAAAGATGGTGAAGGTAATGGTGAATATAAATTCAAGGGCAATGAGGAGAGCACCCAGACAAATATGAAAAATTTATCAGACAAAGGAGAAATTAGTGCCGCAAATGAGGACAGTGCAGAGAATAGCACCGTAAATAAACATATTGGATCTAATAGCTTTGAAGATGAAGATAATGAACAAAGGATACAGAATCCAAAAATGGAAACTAACTCTAATGCACAGCACAATGTTAACAACAAAGATATCGACGATGAAGATTTAGAAGAAAAACTACAACTTCAAGCTTCAAAAGTTCAACATTTATCTGATAAAGCTCATGTCATGGATGATAAAGGATATGCTATGGAGAGTGATGTCAGTGAAAGGCTGATATACAACCTATTTTTGAGCTATTTTTTCTTGCAGAATTAA 2199 0.3975 MNPPTIDFKVDLNSERVEEEKMEGGSMLYCDLCDTEVVYKLAQMLLPGLATSCVDSTAGSFKTPGSVAVDLRKEMIIYITQRSETFVAESIVLDGGPNGEESDHPFDIISNFVDDFAISKRNLFTRVSGLLLTDMREDKIDDFMQEMELTGFWPLERRETIAEAILKNVDIKNEFHCAMKFRSVDDLAVHAFHCNFRPLFCENEGCNARLIAKHLEKHDSICPFKIIPCEQKCSDSIMRRAMDRHCITVCPMKLVDCPFHSLGCRSAIAQCVIEKHCADDVRSHLWHLLKGMYKQASGEDLQRRVQQIVQASPGSRLAEARDVRSLNFVVKDIEAKLGPFELGSAKKNSTETLTKNNGGKNVATNANGSEESSKTPDLINSSHQAEVSAEKKNSVETIANNNNGGNSVANAKGSGESTKAPDMGNSSNKAERSFEKKNIAETVAEYDDGRSSVTNTNGSEESTNALHMVNLYTTEVSADKKDSLDITTNEKGSEESTEALDMVDLLEKVEARGIIHMDSSENTENKDGKHSHIESRKSNERETIHIESNGSEERTQSCIESKSNEVDKQNPIMASLSNEDETSLMNMDGVQMYIKTKDGEGNGEYKFKGNEESTQTNMKNLSDKGEISAANEDSAENSTVNKHIGSNSFEDEDNEQRIQNPKMETNSNAQHNVNNKDIDDEDLEEKLQLQASKVQHLSDKAHVMDDKGYAMESDVSERLIYNLFLSYFFLQN 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01023 732 ProSiteProfiles Zinc finger TRAF-type profile. 218 265 IPR001293 GO:0008270
Arst6g01023 732 MobiDBLite consensus disorder prediction 608 624 - -
Arst6g01023 732 MobiDBLite consensus disorder prediction 348 434 - -
Arst6g01023 732 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 218 282 IPR013083 -
Arst6g01023 732 MobiDBLite consensus disorder prediction 348 428 - -
Arst6g01023 732 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 29 446 - -
Arst6g01023 732 MobiDBLite consensus disorder prediction 631 645 - -
Arst6g01023 732 MobiDBLite consensus disorder prediction 515 549 - -
Arst6g01023 732 MobiDBLite consensus disorder prediction 550 571 - -
Arst6g01023 732 SUPERFAMILY TRAF domain-like 183 229 - -
Arst6g01023 732 MobiDBLite consensus disorder prediction 515 571 - -
Arst6g01023 732 MobiDBLite consensus disorder prediction 597 655 - -
Arst6g01023 732 Pfam TRAF-type zinc finger 218 276 IPR001293 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01023 Arst-Chr6 9322523 9325513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01023 - - adu:107492584 1443.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01023 6 9322523 9325513 Arst6g01023 6 9322523 9325513 ECH